MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP082198 Location: 1844574..1887801 Organism: Streptococcus suis strain Transconjugant cNJ3 Replicon: chromosome
Accession: NZ_CP082198 Location: 1844574..1887801 Organism: Streptococcus suis strain Transconjugant cNJ3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6968_RS09065 (K6968_09065) | 1840516..1843635 | + | 3120 | WP_012775354.1 | DUF6359 domain-containing protein | - |
| K6968_RS09070 (K6968_09070) | 1843715..1844581 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| K6968_RS09075 (K6968_09075) | 1844574..1845578 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| K6968_RS09080 (K6968_09080) | 1845724..1846497 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| K6968_RS09085 (K6968_09085) | 1846490..1847311 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| K6968_RS09090 (K6968_09090) | 1847321..1848358 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| K6968_RS09095 (K6968_09095) | 1848472..1850925 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| K6968_RS09100 (K6968_09100) | 1850931..1851389 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| K6968_RS09105 (K6968_09105) | 1851539..1851877 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| K6968_RS09110 (K6968_09110) | 1851877..1852578 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| K6968_RS09115 (K6968_09115) | 1852841..1853881 | - | 1041 | WP_012027862.1 | translation elongation factor Ts | - |
| K6968_RS09120 (K6968_09120) | 1854037..1854813 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| K6968_RS09125 (K6968_09125) | 1855160..1855672 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| K6968_RS09135 (K6968_09135) | 1856326..1861404 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| K6968_RS09140 (K6968_09140) | 1861548..1862087 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| K6968_RS09145 (K6968_09145) | 1862197..1862373 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| K6968_RS09150 (K6968_09150) | 1862383..1862535 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| K6968_RS09155 (K6968_09155) | 1862569..1864782 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| K6968_RS09160 (K6968_09160) | 1864935..1865903 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| K6968_RS09165 (K6968_09165) | 1865905..1866771 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| K6968_RS09170 (K6968_09170) | 1866798..1867610 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| K6968_RS09175 (K6968_09175) | 1867712..1868578 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| K6968_RS09180 (K6968_09180) | 1868578..1869519 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| K6968_RS09185 (K6968_09185) | 1869509..1870747 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| K6968_RS09190 (K6968_09190) | 1870748..1871380 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| K6968_RS09195 (K6968_09195) | 1871373..1872032 | - | 660 | WP_012027876.1 | hypothetical protein | VF |
| K6968_RS09200 (K6968_09200) | 1872047..1872922 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| K6968_RS09210 (K6968_09210) | 1873819..1875396 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein | - |
| K6968_RS09215 (K6968_09215) | 1875393..1876634 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| K6968_RS09220 (K6968_09220) | 1877003..1877866 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| K6968_RS09225 (K6968_09225) | 1878356..1880800 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| K6968_RS09230 (K6968_09230) | 1880813..1882543 | - | 1731 | WP_012775361.1 | membrane protein | - |
| K6968_RS09235 (K6968_09235) | 1882908..1883780 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| K6968_RS09240 (K6968_09240) | 1883800..1884330 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| K6968_RS09245 (K6968_09245) | 1884344..1884601 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| K6968_RS09250 (K6968_09250) | 1884603..1884863 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K6968_RS09255 (K6968_09255) | 1884939..1885394 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| K6968_RS09260 (K6968_09260) | 1885401..1885730 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K6968_RS09265 (K6968_09265) | 1885720..1886007 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| K6968_RS09270 (K6968_09270) | 1886105..1886473 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| K6968_RS09275 (K6968_09275) | 1886466..1887035 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| K6968_RS09280 (K6968_09280) | 1887019..1887801 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| K6968_RS09285 (K6968_09285) | 1887908..1888045 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| K6968_RS09290 (K6968_09290) | 1888213..1889208 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| K6968_RS09295 (K6968_09295) | 1889228..1890040 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| K6968_RS09300 (K6968_09300) | 1890024..1890383 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| K6968_RS09305 (K6968_09305) | 1890454..1891848 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |