MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP081189 Location: 879687..891012 Organism: Salmonella enterica strain sg1722-2 Replicon: chromosome
Accession: NZ_CP081189 Location: 879687..891012 Organism: Salmonella enterica strain sg1722-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4F90_RS04250 (875133) | 875133..876231 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| K4F90_RS04255 (876241) | 876241..877758 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| K4F90_RS04260 (877834) | 877834..878379 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| K4F90_RS04265 (878644) | 878644..879402 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| K4F90_RS04275 (879687) | 879687..880493 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| K4F90_RS04280 (880768) | 880768..881019 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| K4F90_RS04285 (881196) | 881196..881423 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| K4F90_RS04290 (881423) | 881423..881821 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| K4F90_RS04295 (882627) | 882627..883163 | + | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| K4F90_RS04300 (883210) | 883210..883842 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| K4F90_RS04305 (884561) | 884561..885145 | + | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| K4F90_RS04310 (885265) | 885265..887754 | + | 2490 | WP_000705483.1 | Outer membrane usher protein PapC | VF |
| K4F90_RS04315 (887795) | 887795..888538 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| K4F90_RS04320 (888535) | 888535..889611 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| K4F90_RS04325 (889755) | 889755..890267 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| K4F90_RS04330 (890254) | 890254..891012 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| K4F90_RS04335 (891222) | 891222..892058 | - | 837 | WP_000503692.1 | nickel/cobalt efflux protein RcnA | - |
| K4F90_RS04340 (892180) | 892180..892452 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| K4F90_RS04345 (892483) | 892483..893712 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| K4F90_RS04350 (893854) | 893854..894309 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| K4F90_RS04355 (894413) | 894413..895276 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |