MGE detailed information
MGE type: Prophage MGE length: 28001 bp
Accession: NZ_CP081189 Location: 2057993..2085993 Organism: Salmonella enterica strain sg1722-2 Replicon: chromosome
Accession: NZ_CP081189 Location: 2057993..2085993 Organism: Salmonella enterica strain sg1722-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4F90_RS09920 () | 2054266..2054907 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| K4F90_RS09925 () | 2055007..2056185 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K4F90_RS09930 () | 2056316..2056606 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K4F90_RS09935 () | 2056674..2057027 | + | 354 | WP_001042119.1 | protein YebF | - |
| K4F90_RS09940 () | 2057121..2057780 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K4F90_RS09945 () | 2057993..2060044 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| K4F90_RS09950 () | 2060079..2060777 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| K4F90_RS09955 () | 2060801..2061457 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| K4F90_RS09960 () | 2061565..2061795 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K4F90_RS09965 () | 2061933..2062307 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K4F90_RS09970 () | 2062308..2063183 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| K4F90_RS09975 () | 2063200..2063553 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2063653..2063798 | - | 146 | - | - | Antitoxin Detail |
| - | 2063693..2063796 | + | 104 | - | - | Toxin Detail |
| K4F90_RS09980 () | 2063927..2064850 | - | 924 | Protein_1955 | hypothetical protein ; Integrase | Integrase |
| K4F90_RS09985 () | 2065114..2065575 | - | 462 | Protein_1956 | DNA breaking-rejoining protein | - |
| K4F90_RS09990 () | 2065564..2065755 | + | 192 | Protein_1957 | glycoside hydrolase family 19 protein | - |
| K4F90_RS09995 () | 2065809..2066342 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| K4F90_RS10000 () | 2066599..2066766 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| K4F90_RS10005 () | 2066831..2067019 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| K4F90_RS10010 () | 2067074..2067334 | + | 261 | Protein_1961 | DUF1441 family protein | - |
| K4F90_RS10015 () | 2067549..2067893 | + | 345 | Protein_1962 | macro domain-containing protein | - |
| K4F90_RS10020 () | 2067903..2068373 | + | 471 | Protein_1963 | tail fiber assembly protein | - |
| K4F90_RS10025 () | 2068470..2068670 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| K4F90_RS10030 () | 2069060..2069240 | - | 181 | Protein_1965 | IS3 family transposase | - |
| K4F90_RS10035 () | 2069240..2069365 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| K4F90_RS24605 () | 2069879..2070025 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| K4F90_RS10040 () | 2070019..2070186 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| K4F90_RS10045 () | 2070513..2071127 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| K4F90_RS10050 () | 2071137..2071295 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K4F90_RS10055 () | 2071428..2072342 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| K4F90_RS10060 () | 2073655..2074077 | - | 423 | Protein_1972 | hypothetical protein ; Integrase | Integrase |
| K4F90_RS10065 () | 2074147..2075341 | + | 1195 | Protein_1973 | IS256 family transposase IS285 | Transposase |
| K4F90_RS10070 () | 2075487..2075627 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| K4F90_RS10075 () | 2075793..2076062 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| K4F90_RS10080 () | 2076432..2076851 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| K4F90_RS10085 () | 2077239..2077715 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| K4F90_RS10090 () | 2078045..2078440 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K4F90_RS10095 () | 2079123..2079845 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| K4F90_RS10100 () | 2080130..2080294 | + | 165 | WP_001134856.1 | membrane protein | - |
| K4F90_RS10105 () | 2080518..2081168 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| K4F90_RS10110 () | 2081187..2081378 | - | 192 | WP_000457836.1 | YebW family protein | - |
| K4F90_RS10115 () | 2081489..2081725 | - | 237 | WP_024131108.1 | YebV family protein | - |
| K4F90_RS10120 () | 2081843..2083282 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K4F90_RS10125 () | 2083360..2085993 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| K4F90_RS10130 () | 2085962..2087245 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| K4F90_RS10135 () | 2087374..2087871 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| K4F90_RS10140 () | 2087969..2088655 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| K4F90_RS10145 () | 2088675..2090723 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.003 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.008 |