MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP081187 Location: 879487..890812 Organism: Salmonella enterica strain sg1722-1 Replicon: chromosome
Accession: NZ_CP081187 Location: 879487..890812 Organism: Salmonella enterica strain sg1722-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4F82_RS04255 (874933) | 874933..876031 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| K4F82_RS04260 (876041) | 876041..877558 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| K4F82_RS04265 (877634) | 877634..878179 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| K4F82_RS04270 (878444) | 878444..879202 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| K4F82_RS04280 (879487) | 879487..880293 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| K4F82_RS04285 (880568) | 880568..880819 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| K4F82_RS04290 (880996) | 880996..881223 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| K4F82_RS04295 (881223) | 881223..881621 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| K4F82_RS04300 (882427) | 882427..882963 | + | 537 | WP_001038506.1 | hypothetical protein | VF |
| K4F82_RS04305 (883010) | 883010..883642 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| K4F82_RS04310 (884361) | 884361..884945 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| K4F82_RS04315 (885065) | 885065..887554 | + | 2490 | WP_000705483.1 | hypothetical protein | VF |
| K4F82_RS04320 (887595) | 887595..888338 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| K4F82_RS04325 (888335) | 888335..889411 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| K4F82_RS04330 (889555) | 889555..890067 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| K4F82_RS04335 (890054) | 890054..890812 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| K4F82_RS04340 (891022) | 891022..891858 | - | 837 | WP_000503692.1 | nickel/cobalt efflux protein RcnA | - |
| K4F82_RS04345 (891980) | 891980..892252 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| K4F82_RS04350 (892283) | 892283..893512 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| K4F82_RS04355 (893654) | 893654..894109 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| K4F82_RS04360 (894213) | 894213..895076 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |