MGE detailed information
MGE type: Conjugative plasmid MGE length: 98807 bp
Accession: NZ_CP080258 Location: 1..98807 Organism: Escherichia coli strain SJC33 Replicon: plasmid pSJC33-3
Accession: NZ_CP080258 Location: 1..98807 Organism: Escherichia coli strain SJC33 Replicon: plasmid pSJC33-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZ313_RS24360 (3) | 3..314 | + | 312 | Protein_0 | conjugation system SOS inhibitor PsiB | - |
| KZ313_RS24365 (311) | 311..1030 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| KZ313_RS24370 (1027) | 1027..1623 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| KZ313_RS24375 (2090) | 2090..2588 | + | 499 | Protein_3 | antirestriction protein ArdA | - |
| KZ313_RS24380 (3317) | 3317..3751 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| KZ313_RS24385 (3845) | 3845..4111 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| KZ313_RS24390 (4176) | 4176..5066 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| KZ313_RS24395 (5066) | 5066..5311 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| KZ313_RS24400 (5342) | 5342..5593 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| KZ313_RS24405 (5627) | 5627..5824 | - | 198 | WP_151120034.1 | hypothetical protein | - |
| KZ313_RS24410 (6173) | 6173..7021 | + | 849 | WP_001077021.1 | DUF4942 domain-containing protein | - |
| KZ313_RS24415 (7107) | 7107..7442 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| KZ313_RS24420 (7676) | 7676..8008 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| KZ313_RS24425 (8019) | 8019..10718 | + | 2700 | WP_010891268.1 | Protein TraI | Relaxase |
| KZ313_RS24430 (10755) | 10755..13046 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| KZ313_RS24435 (13039) | 13039..14109 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| KZ313_RS24440 (14128) | 14128..15336 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (15516) | 15516..15578 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (15516) | 15516..15578 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (15516) | 15516..15578 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (15516) | 15516..15578 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| KZ313_RS24445 (15628) | 15628..15780 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| KZ313_RS24450 (15852) | 15852..16103 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| KZ313_RS25560 (16465) | 16465..16697 | + | 233 | Protein_19 | hypothetical protein | - |
| KZ313_RS24455 (16762) | 16762..16938 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| KZ313_RS24460 (17330) | 17330..17539 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| KZ313_RS24465 (17611) | 17611..18261 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| KZ313_RS24470 (18335) | 18335..20503 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| KZ313_RS24475 (20600) | 20600..21184 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| KZ313_RS24480 (21213) | 21213..22415 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| KZ313_RS24485 (22382) | 22382..22996 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| KZ313_RS24490 (22996) | 22996..26040 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| KZ313_RS24495 (26130) | 26130..26930 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| KZ313_RS24500 (26914) | 26914..27102 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| KZ313_RS24505 (27166) | 27166..27570 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| KZ313_RS24510 (27621) | 27621..28148 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| KZ313_RS24515 (28148) | 28148..28852 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| KZ313_RS24520 (28852) | 28852..30141 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| KZ313_RS24525 (30144) | 30144..31127 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| KZ313_RS24530 (31138) | 31138..31830 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| KZ313_RS24535 (31827) | 31827..32174 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| KZ313_RS24540 (32192) | 32192..35959 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| KZ313_RS24545 (36049) | 36049..36600 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| KZ313_RS24550 (36615) | 36615..36905 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| KZ313_RS24555 (36902) | 36902..38050 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| KZ313_RS24560 (38047) | 38047..38865 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| KZ313_RS24565 (38862) | 38862..39320 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| KZ313_RS24570 (39715) | 39715..40299 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| KZ313_RS24575 (40359) | 40359..41561 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| KZ313_RS24580 (41646) | 41646..42470 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| KZ313_RS24585 (42621) | 42621..43775 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| KZ313_RS25565 (43774) | 43774..44127 | + | 354 | WP_001393368.1 | hypothetical protein | - |
| KZ313_RS24600 (45296) | 45296..45544 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| KZ313_RS24605 (45541) | 45541..46833 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| KZ313_RS24610 (46833) | 46833..47489 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| KZ313_RS24615 (47474) | 47474..48034 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| KZ313_RS24620 (48044) | 48044..48658 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| KZ313_RS24625 (48676) | 48676..49773 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| KZ313_RS24630 (49786) | 49786..51339 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| KZ313_RS24635 (51350) | 51350..51802 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| KZ313_RS24640 (51789) | 51789..53084 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| KZ313_RS24645 (53077) | 53077..54759 | - | 1683 | WP_032311054.1 | Outer membrane lipoprotein BfpB | VF |
| KZ313_RS24650 (54773) | 54773..55210 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| KZ313_RS24655 (55210) | 55210..56277 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| KZ313_RS24660 (56951) | 56951..57403 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| KZ313_RS24665 (57446) | 57446..57700 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| KZ313_RS24670 (57968) | 57968..58534 | - | 567 | WP_000776428.1 | protein TraD | - |
| KZ313_RS24675 (58548) | 58548..59231 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| KZ313_RS24680 (59485) | 59485..60018 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| KZ313_RS24685 (60460) | 60460..60747 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| KZ313_RS24690 (60665) | 60665..60943 | - | 279 | WP_219065241.1 | ash family protein | - |
| KZ313_RS24695 (61901) | 61901..62932 | + | 1032 | WP_000907874.1 | plasmid replication initiator RepA | - |
| KZ313_RS24700 (63628) | 63628..63786 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| KZ313_RS24705 (63841) | 63841..64110 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| KZ313_RS24710 (64110) | 64110..64388 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| KZ313_RS24715 (64428) | 64428..65276 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| KZ313_RS24720 (65393) | 65393..65866 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| KZ313_RS25570 (67896) | 67896..68162 | - | 267 | Protein_75 | hypothetical protein | - |
| KZ313_RS24735 (68162) | 68162..68656 | - | 495 | WP_023278058.1 | hypothetical protein | - |
| KZ313_RS24740 (68712) | 68712..69314 | - | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| KZ313_RS24745 (69855) | 69855..71054 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| KZ313_RS24750 (71064) | 71064..71252 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| KZ313_RS24755 (71649) | 71649..72794 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| KZ313_RS24760 (72888) | 72888..73421 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| KZ313_RS24765 (73418) | 73418..73735 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| KZ313_RS24770 (74463) | 74463..75698 | + | 1236 | WP_228745765.1 | colicin Ia central receptor-binding domain-containing protein | - |
| KZ313_RS24775 (75715) | 75715..76050 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| KZ313_RS24780 (76179) | 76179..76526 | + | 348 | WP_000142441.1 | DUF6404 family protein | - |
| KZ313_RS24785 (76544) | 76544..77134 | - | 591 | WP_000194573.1 | hypothetical protein | - |
| KZ313_RS24790 (77134) | 77134..77391 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| KZ313_RS24795 (78064) | 78064..78333 | + | 270 | WP_258057140.1 | hypothetical protein | - |
| KZ313_RS24800 (78326) | 78326..79015 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| KZ313_RS24805 (79012) | 79012..79800 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| KZ313_RS24810 (79980) | 79980..80624 | + | 645 | WP_001144036.1 | ParA family protein | - |
| KZ313_RS24815 (80711) | 80711..81019 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| KZ313_RS24820 (81433) | 81433..82413 | + | 981 | WP_000688519.1 | plasmid segregation protein ParM | - |
| KZ313_RS24825 (82406) | 82406..82822 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| KZ313_RS24830 (82824) | 82824..84098 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| KZ313_RS24835 (84098) | 84098..84535 | - | 438 | WP_000109072.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KZ313_RS24840 (84532) | 84532..84780 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| KZ313_RS24845 (85198) | 85198..86100 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| KZ313_RS24850 (86097) | 86097..86408 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| KZ313_RS24855 (86484) | 86484..87167 | + | 684 | WP_000086121.1 | DNA methylase | - |
| KZ313_RS24860 (87168) | 87168..87389 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| KZ313_RS24865 (87319) | 87319..87837 | + | 519 | WP_225089741.1 | DUF1380 family protein | - |
| KZ313_RS24870 (87888) | 87888..88664 | + | 777 | WP_024135924.1 | hypothetical protein | - |
| KZ313_RS24875 (89082) | 89082..89507 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| KZ313_RS24880 (89554) | 89554..89976 | + | 423 | WP_000271763.1 | DUF1380 family protein | - |
| KZ313_RS25575 (90194) | 90194..90367 | - | 174 | Protein_106 | hypothetical protein | - |
| KZ313_RS24890 (90669) | 90669..91208 | + | 540 | WP_000290791.1 | single-stranded DNA-binding protein | - |
| KZ313_RS24895 (91271) | 91271..91504 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| KZ313_RS24900 (91570) | 91570..93528 | + | 1959 | WP_219805976.1 | ParB/RepB/Spo0J family partition protein | - |
| KZ313_RS24905 (93583) | 93583..94017 | + | 435 | WP_000845934.1 | conjugation system SOS inhibitor PsiB | - |
| KZ313_RS24910 (94023) | 94023..94348 | + | 326 | Protein_111 | plasmid SOS inhibition protein A | - |
| KZ313_RS24915 (94345) | 94345..94941 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| KZ313_RS24920 (95404) | 95404..95904 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| KZ313_RS24925 (96216) | 96216..96284 | - | 69 | Protein_114 | pilus protein | - |
| KZ313_RS24930 (96637) | 96637..97071 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| KZ313_RS24935 (97164) | 97164..97430 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| KZ313_RS24940 (97495) | 97495..98385 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| KZ313_RS24945 (98385) | 98385..98630 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| KZ313_RS24950 (98661) | 98661..98807 | - | 147 | Protein_119 | XRE family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA10119, TA30466 | NC_025198 | 1..92339 | 0.005 |