MGE detailed information
MGE type: Genomic_island MGE length: 20176 bp
Accession: NZ_CP079992 Location: 1126040..1146215 Organism: Escherichia coli strain KMS2001 Replicon: chromosome
Accession: NZ_CP079992 Location: 1126040..1146215 Organism: Escherichia coli strain KMS2001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYK85_RS05340 (1121180) | 1121180..1121983 | + | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| KYK85_RS05345 (1121980) | 1121980..1122894 | - | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| KYK85_RS05350 (1123135) | 1123135..1123935 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| KYK85_RS05355 (1123966) | 1123966..1124562 | + | 597 | Protein_1053 | methyltransferase domain-containing protein | - |
| KYK85_RS05360 (1124610) | 1124610..1125968 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| KYK85_RS05365 (1126040) | 1126040..1126795 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| KYK85_RS05370 (1126829) | 1126829..1127551 | + | 723 | WP_240275576.1 | class I SAM-dependent methyltransferase | - |
| KYK85_RS05375 (1127548) | 1127548..1128015 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| KYK85_RS05380 (1128080) | 1128080..1128811 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| KYK85_RS05390 (1129348) | 1129348..1130133 | + | 786 | WP_001086141.1 | lipoprotein | - |
| KYK85_RS05395 (1130270) | 1130270..1130749 | - | 480 | WP_001236645.1 | protein YkfM | - |
| KYK85_RS05400 (1130759) | 1130759..1131115 | - | 357 | Protein_1061 | hypothetical protein | - |
| KYK85_RS05405 (1131113) | 1131113..1131391 | + | 279 | Protein_1062 | ISAs1 family transposase | - |
| KYK85_RS05410 (1131432) | 1131432..1132202 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| KYK85_RS05415 (1132383) | 1132383..1132829 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| KYK85_RS05420 (1132872) | 1132872..1135316 | - | 2445 | WP_000973083.1 | hypothetical protein | VF |
| KYK85_RS05425 (1135556) | 1135556..1136134 | + | 579 | WP_000284050.1 | Phosphocarrier protein HPr | VF |
| KYK85_RS05430 (1136340) | 1136340..1137107 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| KYK85_RS05435 (1137078) | 1137078..1137818 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| KYK85_RS05440 (1137974) | 1137974..1138252 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| KYK85_RS05445 (1138255) | 1138255..1138515 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| KYK85_RS05450 (1138725) | 1138725..1139474 | + | 750 | WP_000056849.1 | Ktr system potassium uptake protein A | VF |
| KYK85_RS05455 (1139650) | 1139650..1140147 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| KYK85_RS05460 (1140371) | 1140371..1142083 | - | 1713 | Protein_1073 | hypothetical protein | VF |
| KYK85_RS05465 (1142055) | 1142055..1142840 | + | 786 | WP_000207552.1 | Peptide deformylase | VF |
| KYK85_RS05470 (1142911) | 1142911..1143966 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| KYK85_RS05475 (1144018) | 1144018..1144311 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| KYK85_RS05480 (1144314) | 1144314..1144712 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| KYK85_RS05485 (1144722) | 1144722..1145174 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| KYK85_RS05490 (1145492) | 1145492..1145698 | + | 207 | Protein_1079 | RtcB family protein | - |
| KYK85_RS05495 (1145694) | 1145694..1146215 | + | 522 | Protein_1080 | peptide chain release factor H | - |
| KYK85_RS05500 (1146272) | 1146272..1147729 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| KYK85_RS05505 (1147990) | 1147990..1148448 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (1149044) | 1149044..1149124 | + | 81 | NuclAT_4 | - | - |
| - (1149044) | 1149044..1149124 | + | 81 | NuclAT_4 | - | - |
| - (1149044) | 1149044..1149124 | + | 81 | NuclAT_4 | - | - |
| - (1149044) | 1149044..1149124 | + | 81 | NuclAT_4 | - | - |
| KYK85_RS05510 (1148540) | 1148540..1149784 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| KYK85_RS05515 (1149842) | 1149842..1150243 | + | 402 | WP_000174689.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.001 |