MGE detailed information
MGE type: Genomic_island MGE length: 18673 bp
Accession: NZ_CP079770 Location: 2494430..2513102 Organism: Escherichia coli strain HL15 Replicon: chromosome
Accession: NZ_CP079770 Location: 2494430..2513102 Organism: Escherichia coli strain HL15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (2490018) | 2490018..2490098 | - | 81 | NuclAT_12 | - | - |
| - (2490018) | 2490018..2490098 | - | 81 | NuclAT_12 | - | - |
| - (2490018) | 2490018..2490098 | - | 81 | NuclAT_12 | - | - |
| - (2490018) | 2490018..2490098 | - | 81 | NuclAT_12 | - | - |
| KYX58_RS13915 (2490694) | 2490694..2491152 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| KYX58_RS13920 (2491413) | 2491413..2492870 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| KYX58_RS13925 (2492927) | 2492927..2493448 | - | 522 | Protein_2450 | peptide chain release factor H | - |
| KYX58_RS13930 (2493444) | 2493444..2493650 | - | 207 | Protein_2451 | RtcB family protein | - |
| KYX58_RS13935 (2493968) | 2493968..2494420 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| KYX58_RS13940 (2494430) | 2494430..2494828 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| KYX58_RS13945 (2494831) | 2494831..2495124 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| KYX58_RS13950 (2495176) | 2495176..2496231 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| KYX58_RS13955 (2496302) | 2496302..2497087 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| KYX58_RS13960 (2497059) | 2497059..2498771 | + | 1713 | Protein_2457 | hypothetical protein | VF |
| KYX58_RS13965 (2498995) | 2498995..2499492 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| KYX58_RS13970 (2499668) | 2499668..2500417 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| KYX58_RS13975 (2500627) | 2500627..2500887 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| KYX58_RS13980 (2500890) | 2500890..2501168 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| KYX58_RS13985 (2501324) | 2501324..2502064 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| KYX58_RS13990 (2502035) | 2502035..2502802 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| KYX58_RS13995 (2503008) | 2503008..2503586 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| KYX58_RS14000 (2503826) | 2503826..2506270 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| KYX58_RS14005 (2506313) | 2506313..2506759 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| KYX58_RS14010 (2506940) | 2506940..2507710 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| KYX58_RS14015 (2507751) | 2507751..2508029 | - | 279 | Protein_2468 | ISAs1 family transposase | - |
| KYX58_RS14020 (2508027) | 2508027..2508383 | + | 357 | Protein_2469 | hypothetical protein | - |
| KYX58_RS14025 (2508393) | 2508393..2508872 | + | 480 | WP_001236645.1 | protein YkfM | - |
| KYX58_RS14030 (2509009) | 2509009..2509794 | - | 786 | WP_001086141.1 | lipoprotein | - |
| KYX58_RS14040 (2510331) | 2510331..2511062 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| KYX58_RS14045 (2511127) | 2511127..2511594 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| KYX58_RS14050 (2511591) | 2511591..2512313 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| KYX58_RS14055 (2512347) | 2512347..2513102 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| KYX58_RS14060 (2513174) | 2513174..2514532 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| KYX58_RS14065 (2514580) | 2514580..2515176 | - | 597 | Protein_2477 | methyltransferase domain-containing protein | - |
| KYX58_RS14070 (2515207) | 2515207..2516007 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| KYX58_RS14075 (2516248) | 2516248..2517162 | + | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| KYX58_RS14080 (2517159) | 2517159..2517962 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.003 |