MGE detailed information
MGE type: Genomic_island MGE length: 18673 bp
Accession: NZ_CP079767 Location: 2489242..2507914 Organism: Escherichia coli strain SF10 Replicon: chromosome
Accession: NZ_CP079767 Location: 2489242..2507914 Organism: Escherichia coli strain SF10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (2484830) | 2484830..2484910 | - | 81 | NuclAT_12 | - | - |
| - (2484830) | 2484830..2484910 | - | 81 | NuclAT_12 | - | - |
| - (2484830) | 2484830..2484910 | - | 81 | NuclAT_12 | - | - |
| - (2484830) | 2484830..2484910 | - | 81 | NuclAT_12 | - | - |
| KX927_RS14575 (2485506) | 2485506..2485964 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| KX927_RS14580 (2486225) | 2486225..2487682 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| KX927_RS14585 (2487739) | 2487739..2488260 | - | 522 | Protein_2452 | peptide chain release factor H | - |
| KX927_RS14590 (2488256) | 2488256..2488462 | - | 207 | Protein_2453 | RtcB family protein | - |
| KX927_RS14595 (2488780) | 2488780..2489232 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| KX927_RS14600 (2489242) | 2489242..2489640 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| KX927_RS14605 (2489643) | 2489643..2489936 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| KX927_RS14610 (2489988) | 2489988..2491043 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| KX927_RS14615 (2491114) | 2491114..2491899 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| KX927_RS14620 (2491871) | 2491871..2493583 | + | 1713 | Protein_2459 | Flagellar biosynthesis protein FlhA | VF |
| KX927_RS14625 (2493807) | 2493807..2494304 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| KX927_RS14630 (2494480) | 2494480..2495229 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| KX927_RS14635 (2495439) | 2495439..2495699 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| KX927_RS14640 (2495702) | 2495702..2495980 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| KX927_RS14645 (2496136) | 2496136..2496876 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| KX927_RS14650 (2496847) | 2496847..2497614 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| KX927_RS14655 (2497820) | 2497820..2498398 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| KX927_RS14660 (2498638) | 2498638..2501082 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| KX927_RS14665 (2501125) | 2501125..2501571 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| KX927_RS14670 (2501752) | 2501752..2502522 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| KX927_RS14675 (2502563) | 2502563..2502841 | - | 279 | Protein_2470 | ISAs1 family transposase | - |
| KX927_RS14680 (2502839) | 2502839..2503195 | + | 357 | Protein_2471 | hypothetical protein | - |
| KX927_RS14685 (2503205) | 2503205..2503684 | + | 480 | WP_001236645.1 | protein YkfM | - |
| KX927_RS14690 (2503821) | 2503821..2504606 | - | 786 | WP_001086141.1 | lipoprotein | - |
| KX927_RS14700 (2505143) | 2505143..2505874 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| KX927_RS14705 (2505939) | 2505939..2506406 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| KX927_RS14710 (2506403) | 2506403..2507125 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| KX927_RS14715 (2507159) | 2507159..2507914 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| KX927_RS14720 (2507986) | 2507986..2509344 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| KX927_RS14725 (2509392) | 2509392..2509988 | - | 597 | Protein_2479 | methyltransferase domain-containing protein | - |
| KX927_RS14730 (2510019) | 2510019..2510819 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| KX927_RS14735 (2511060) | 2511060..2511974 | + | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| KX927_RS14740 (2511971) | 2511971..2512774 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA28996, TA28997 | NC_020518 | 223678..243064 | 0.003 |