MGE detailed information
MGE type: Prophage MGE length: 52577 bp
Accession: NZ_CP077857 Location: 2635813..2688389 Organism: Staphylococcus aureus strain L4 Replicon: chromosome
Accession: NZ_CP077857 Location: 2635813..2688389 Organism: Staphylococcus aureus strain L4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU533_RS12930 (2631546) | 2631546..2631830 | + | 285 | WP_000917289.1 | co-chaperone GroES | - |
| KU533_RS12935 (2631906) | 2631906..2633522 | + | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| KU533_RS12940 (2634062) | 2634062..2635390 | - | 1329 | WP_149861555.1 | TrkH family potassium uptake protein | - |
| KU533_RS12945 (2635813) | 2635813..2637036 | - | 1224 | WP_031763515.1 | ArgE/DapE family deacylase | - |
| KU533_RS12950 (2637472) | 2637472..2638527 | + | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| KU533_RS12955 (2638549) | 2638549..2639565 | + | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| KU533_RS12960 (2639803) | 2639803..2640630 | - | 828 | Protein_2511 | sphingomyelin phosphodiesterase | - |
| KU533_RS12965 (2640684) | 2640684..2641721 | - | 1038 | WP_000857191.1 | site-specific integrase | - |
| KU533_RS12970 (2641780) | 2641780..2642244 | - | 465 | WP_000825947.1 | hypothetical protein | - |
| KU533_RS12975 (2642344) | 2642344..2642526 | - | 183 | WP_000705248.1 | hypothetical protein | - |
| KU533_RS12980 (2642730) | 2642730..2643071 | - | 342 | WP_000591749.1 | hypothetical protein | - |
| KU533_RS12985 (2643077) | 2643077..2644009 | - | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| KU533_RS12990 (2644025) | 2644025..2644738 | - | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| KU533_RS12995 (2644701) | 2644701..2644874 | + | 174 | WP_001801500.1 | hypothetical protein | - |
| KU533_RS13000 (2644871) | 2644871..2645134 | + | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| KU533_RS13005 (2645150) | 2645150..2645365 | + | 216 | WP_001025874.1 | DUF2829 domain-containing protein | - |
| KU533_RS13010 (2645354) | 2645354..2645683 | - | 330 | WP_000128907.1 | hypothetical protein | - |
| KU533_RS13015 (2645734) | 2645734..2646486 | + | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| KU533_RS13020 (2646502) | 2646502..2646699 | + | 198 | WP_001148855.1 | hypothetical protein | - |
| KU533_RS13025 (2646730) | 2646730..2646870 | + | 141 | WP_000939496.1 | hypothetical protein | - |
| KU533_RS13030 (2646885) | 2646885..2647517 | - | 633 | WP_225798617.1 | hypothetical protein | - |
| KU533_RS13035 (2647576) | 2647576..2647896 | + | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| KU533_RS13040 (2647893) | 2647893..2648054 | + | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| KU533_RS13045 (2648149) | 2648149..2648475 | + | 327 | WP_000165375.1 | DUF2482 family protein | - |
| KU533_RS13050 (2648456) | 2648456..2648716 | + | 261 | WP_000291503.1 | DUF1108 family protein | - |
| KU533_RS13055 (2648725) | 2648725..2648988 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| KU533_RS13060 (2648997) | 2648997..2650940 | + | 1944 | WP_000700577.1 | AAA family ATPase | - |
| KU533_RS13065 (2650942) | 2650942..2651862 | + | 921 | WP_000138472.1 | recombinase RecT | - |
| KU533_RS13070 (2651943) | 2651943..2652560 | + | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| KU533_RS13075 (2652561) | 2652561..2653031 | + | 471 | WP_000934764.1 | single-stranded DNA-binding protein | - |
| KU533_RS13080 (2653061) | 2653061..2653945 | + | 885 | WP_000148316.1 | DnaD domain protein | - |
| KU533_RS13085 (2653952) | 2653952..2654170 | + | 219 | WP_000338531.1 | hypothetical protein | - |
| KU533_RS13090 (2654179) | 2654179..2654488 | + | 310 | Protein_2537 | RusA family crossover junction endodeoxyribonuclease | - |
| KU533_RS13095 (2654501) | 2654501..2654869 | + | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| KU533_RS13100 (2654873) | 2654873..2655115 | + | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| KU533_RS13105 (2655127) | 2655127..2655294 | + | 168 | WP_001624242.1 | hypothetical protein | - |
| KU533_RS13110 (2655287) | 2655287..2655538 | + | 252 | WP_001065091.1 | DUF1024 family protein | Toxin Detail |
| KU533_RS13115 (2655528) | 2655528..2655710 | + | 183 | WP_000028422.1 | hypothetical protein | Antitoxin Detail |
| KU533_RS13120 (2655703) | 2655703..2656245 | + | 543 | WP_000185659.1 | dUTP pyrophosphatase | - |
| KU533_RS13125 (2656282) | 2656282..2656488 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| KU533_RS13130 (2656485) | 2656485..2656871 | + | 387 | WP_000592207.1 | hypothetical protein | - |
| KU533_RS13135 (2656868) | 2656868..2657017 | + | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| KU533_RS13140 (2657017) | 2657017..2657217 | + | 201 | WP_000265043.1 | DUF1514 family protein | - |
| KU533_RS13145 (2657245) | 2657245..2657661 | + | 417 | WP_000590122.1 | hypothetical protein | - |
| KU533_RS13150 (2657893) | 2657893..2658192 | + | 300 | WP_000988336.1 | HNH endonuclease | - |
| KU533_RS13155 (2658322) | 2658322..2658666 | + | 345 | WP_000402904.1 | hypothetical protein | - |
| KU533_RS13160 (2658663) | 2658663..2660324 | + | 1662 | WP_000625088.1 | terminase large subunit | - |
| KU533_RS13165 (2660340) | 2660340..2661527 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| KU533_RS13170 (2661511) | 2661511..2662248 | + | 738 | WP_000642728.1 | Clp protease ClpP | - |
| KU533_RS13175 (2662272) | 2662272..2663417 | + | 1146 | WP_000154559.1 | phage major capsid protein | - |
| KU533_RS13180 (2663437) | 2663437..2663721 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| KU533_RS13185 (2663711) | 2663711..2663995 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| KU533_RS13190 (2663979) | 2663979..2664341 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| KU533_RS13195 (2664338) | 2664338..2664742 | + | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| KU533_RS13200 (2664739) | 2664739..2665146 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| KU533_RS13205 (2665147) | 2665147..2665791 | + | 645 | WP_000268735.1 | phage tail protein | - |
| KU533_RS13210 (2665827) | 2665827..2666057 | + | 231 | Protein_2561 | Ig-like domain-containing protein | - |
| KU533_RS13215 (2666107) | 2666107..2666457 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| KU533_RS13765 (2666511) | 2666511..2666645 | + | 135 | WP_000364140.1 | hypothetical protein | - |
| KU533_RS13220 (2666702) | 2666702..2671231 | + | 4530 | WP_225798618.1 | phage tail tape measure protein | - |
| KU533_RS13225 (2671228) | 2671228..2672712 | + | 1485 | WP_000567413.1 | phage tail family protein | - |
| KU533_RS13230 (2672728) | 2672728..2676513 | + | 3786 | WP_000582190.1 | phage tail spike protein | - |
| KU533_RS13235 (2676503) | 2676503..2676655 | + | 153 | WP_001153681.1 | hypothetical protein | - |
| KU533_RS13240 (2676702) | 2676702..2676989 | + | 288 | WP_001040259.1 | hypothetical protein | - |
| KU533_RS13245 (2677045) | 2677045..2677419 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| KU533_RS13250 (2677840) | 2677840..2678613 | + | 774 | WP_000750406.1 | staphylococcal enterotoxin type A | - |
| KU533_RS13255 (2678722) | 2678722..2678898 | + | 177 | WP_011447039.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| - (2678890) | 2678890..2679029 | - | 140 | NuclAT_0 | - | - |
| - (2678890) | 2678890..2679029 | - | 140 | NuclAT_0 | - | - |
| - (2678890) | 2678890..2679029 | - | 140 | NuclAT_0 | - | - |
| - (2678890) | 2678890..2679029 | - | 140 | NuclAT_0 | - | - |
| KU533_RS13260 (2678951) | 2678951..2679058 | - | 108 | WP_001791821.1 | hypothetical protein | - |
| KU533_RS13265 (2679110) | 2679110..2679364 | + | 255 | WP_000611512.1 | phage holin | - |
| KU533_RS13270 (2679376) | 2679376..2680131 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| KU533_RS13275 (2680322) | 2680322..2680813 | + | 492 | WP_000919350.1 | staphylokinase | - |
| KU533_RS13280 (2681463) | 2681463..2681798 | + | 336 | Protein_2576 | SH3 domain-containing protein | - |
| KU533_RS13285 (2681893) | 2681893..2682342 | - | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| KU533_RS13290 (2683028) | 2683028..2683378 | + | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| KU533_RS13295 (2683431) | 2683431..2683691 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| KU533_RS13300 (2684002) | 2684002..2684181 | - | 180 | WP_000669789.1 | hypothetical protein | - |
| KU533_RS13305 (2684553) | 2684553..2684750 | - | 198 | WP_000239610.1 | phospholipase | - |
| KU533_RS13310 (2685139) | 2685139..2686569 | + | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| KU533_RS13315 (2686584) | 2686584..2686874 | + | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| KU533_RS13320 (2687070) | 2687070..2688389 | + | 1320 | WP_001557163.1 | ISL3-like element IS1181 family transposase | - |
| KU533_RS13325 (2688392) | 2688392..2688466 | + | 75 | Protein_2585 | hypothetical protein | - |
| KU533_RS13330 (2688673) | 2688673..2689959 | - | 1287 | WP_001581722.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| KU533_RS13335 (2690159) | 2690159..2690257 | + | 99 | WP_000990056.1 | hypothetical protein | - |
| KU533_RS13340 (2690500) | 2690500..2690676 | + | 177 | WP_000681968.1 | hypothetical protein | - |
| KU533_RS13345 (2690934) | 2690934..2691314 | + | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| KU533_RS13350 (2691311) | 2691311..2692207 | + | 897 | WP_000991306.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| KU533_RS13355 (2692208) | 2692208..2692888 | + | 681 | WP_000645727.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA22266, TA22270 | NC_009641 | 2089433..2146383 | 0.009 |