MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 102381 bp
Accession: NZ_CP076699 Location: 1..102381 Organism: Escherichia coli strain S10EC Replicon: plasmid pS10EC_A
Accession: NZ_CP076699 Location: 1..102381 Organism: Escherichia coli strain S10EC Replicon: plasmid pS10EC_A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQ259_RS25595 | 1..201 | + | 201 | WP_000993264.1 | DUF3330 domain-containing protein | - |
| KQ259_RS24740 (KQ259_24740) | 327..494 | + | 168 | Protein_1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| KQ259_RS24745 (KQ259_24745) | 547..1251 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KQ259_RS24750 (KQ259_24750) | 1387..2262 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| KQ259_RS24755 (KQ259_24755) | 2309..2602 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| KQ259_RS24760 (KQ259_24760) | 2667..4886 | + | 2220 | Protein_5 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KQ259_RS24765 (KQ259_24765) | 4963..5667 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KQ259_RS24770 (KQ259_24770) | 5721..6161 | - | 441 | Protein_7 | CatB-related O-acetyltransferase | - |
| KQ259_RS24775 (KQ259_24775) | 6299..7129 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| KQ259_RS24780 (KQ259_24780) | 7260..7814 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| KQ259_RS24785 (KQ259_24785) | 7958..8662 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KQ259_RS24790 (KQ259_24790) | 8728..10242 | + | 1515 | Protein_11 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KQ259_RS24795 (KQ259_24795) | 10284..10526 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| KQ259_RS24800 (KQ259_24800) | 10558..11208 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| KQ259_RS24805 (KQ259_24805) | 11314..12513 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| KQ259_RS24810 (KQ259_24810) | 12545..13429 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| KQ259_RS24815 (KQ259_24815) | 13567..13959 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| KQ259_RS24820 (KQ259_24820) | 13963..14712 | + | 750 | Protein_17 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KQ259_RS24825 (KQ259_24825) | 14736..15341 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| KQ259_RS24830 (KQ259_24830) | 15436..16143 | + | 708 | Protein_19 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| KQ259_RS24835 (KQ259_24835) | 16210..16914 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KQ259_RS24840 (KQ259_24840) | 16977..20825 | + | 3849 | Protein_21 | Multifunctional conjugation protein TraI | Relaxase |
| KQ259_RS24845 (KQ259_24845) | 20845..21591 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| KQ259_RS24850 (KQ259_24850) | 21650..22510 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| KQ259_RS24855 (KQ259_24855) | 22613..23173 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| KQ259_RS24860 (KQ259_24860) | 23302..23514 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| KQ259_RS24865 (KQ259_24865) | 23794..24491 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| KQ259_RS24870 (KQ259_24870) | 24536..24997 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| KQ259_RS24875 (KQ259_24875) | 25043..25252 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| KQ259_RS24880 (KQ259_24880) | 25290..25880 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| KQ259_RS24885 (KQ259_24885) | 26120..26374 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| KQ259_RS24890 (KQ259_24890) | 26612..26686 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| KQ259_RS24895 (KQ259_24895) | 26679..27536 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| KQ259_RS24900 (KQ259_24900) | 28475..29128 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| KQ259_RS24905 (KQ259_24905) | 29221..29478 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| KQ259_RS24910 (KQ259_24910) | 29411..29812 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| KQ259_RS24915 (KQ259_24915) | 29949..32120 | - | 2172 | Protein_36 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| KQ259_RS24920 (KQ259_24920) | 32196..32900 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KQ259_RS24925 (KQ259_24925) | 32791..33432 | - | 642 | WP_235692175.1 | reverse transcriptase domain-containing protein | - |
| KQ259_RS25600 | 34554..34796 | - | 243 | WP_001365577.1 | hypothetical protein | - |
| KQ259_RS25605 | 34724..34948 | - | 225 | WP_021538344.1 | hypothetical protein | - |
| KQ259_RS24930 (KQ259_24930) | 34948..35511 | - | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| KQ259_RS24935 (KQ259_24935) | 35558..36919 | - | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| KQ259_RS24940 (KQ259_24940) | 36971..37201 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| KQ259_RS24945 (KQ259_24945) | 38236..38427 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| KQ259_RS24950 (KQ259_24950) | 38424..38846 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| KQ259_RS24955 (KQ259_24955) | 38893..39318 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| KQ259_RS24960 (KQ259_24960) | 39735..40511 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| KQ259_RS24965 (KQ259_24965) | 40562..41080 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| KQ259_RS24970 (KQ259_24970) | 41010..41231 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| KQ259_RS24975 (KQ259_24975) | 41232..41915 | - | 684 | WP_000086185.1 | DNA methylase | - |
| KQ259_RS24980 (KQ259_24980) | 41992..42303 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| KQ259_RS24985 (KQ259_24985) | 42300..43202 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| KQ259_RS24990 (KQ259_24990) | 44069..45040 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| KQ259_RS24995 (KQ259_24995) | 45040..46206 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| KQ259_RS25000 (KQ259_25000) | 46794..47549 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| KQ259_RS25005 (KQ259_25005) | 48323..49129 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| KQ259_RS25010 (KQ259_25010) | 49130..49435 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KQ259_RS25015 (KQ259_25015) | 49437..49655 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KQ259_RS25020 (KQ259_25020) | 50201..50713 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| KQ259_RS25025 (KQ259_25025) | 50747..51865 | - | 1119 | WP_253926428.1 | hypothetical protein | - |
| KQ259_RS25030 (KQ259_25030) | 51957..52382 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| KQ259_RS25035 (KQ259_25035) | 52379..52729 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| KQ259_RS25040 (KQ259_25040) | 52760..54373 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| KQ259_RS25045 (KQ259_25045) | 54584..55357 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| KQ259_RS25050 (KQ259_25050) | 55370..55870 | - | 501 | WP_000528932.1 | HEPN family nuclease | - |
| KQ259_RS25055 (KQ259_25055) | 56135..56365 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| KQ259_RS25060 (KQ259_25060) | 56362..56778 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| KQ259_RS25065 (KQ259_25065) | 56823..60617 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| KQ259_RS25070 (KQ259_25070) | 60998..61228 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| KQ259_RS25075 (KQ259_25075) | 61225..61641 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| KQ259_RS25080 (KQ259_25080) | 61716..63281 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| KQ259_RS25085 (KQ259_25085) | 63266..64288 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| KQ259_RS25610 | 65273..65541 | - | 269 | Protein_74 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KQ259_RS25095 (KQ259_25095) | 65528..65796 | - | 269 | Protein_75 | type II toxin-antitoxin system ParD family antitoxin | - |
| KQ259_RS25100 (KQ259_25100) | 66328..67497 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| KQ259_RS25105 (KQ259_25105) | 67530..67658 | + | 129 | Protein_77 | IS481 family transposase | - |
| KQ259_RS25110 (KQ259_25110) | 67783..67986 | - | 204 | Protein_78 | hypothetical protein | - |
| KQ259_RS25115 (KQ259_25115) | 68092..68367 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQ259_RS25120 (KQ259_25120) | 68367..68651 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KQ259_RS25125 (KQ259_25125) | 69256..70008 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| KQ259_RS25130 (KQ259_25130) | 70054..71019 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| KQ259_RS25135 (KQ259_25135) | 71052..71432 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| KQ259_RS25140 (KQ259_25140) | 71457..72347 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| KQ259_RS25145 (KQ259_25145) | 72748..73188 | + | 441 | Protein_85 | zinc-binding dehydrogenase | - |
| KQ259_RS25150 (KQ259_25150) | 73319..74197 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| KQ259_RS25155 (KQ259_25155) | 74187..75074 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| KQ259_RS25160 (KQ259_25160) | 75085..75909 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| KQ259_RS25165 (KQ259_25165) | 75915..76988 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| KQ259_RS25170 (KQ259_25170) | 76981..78291 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| KQ259_RS25175 (KQ259_25175) | 78350..78658 | - | 309 | Protein_91 | IS4 family transposase ISEc13 | Transposase |
| KQ259_RS25180 (KQ259_25180) | 78735..78908 | - | 174 | WP_000338295.1 | Tn3 family transposase ISPsy39 | Transposase |
| KQ259_RS25185 (KQ259_25185) | 78990..80186 | - | 1197 | Protein_93 | IS3 family transposase | - |
| KQ259_RS25190 (KQ259_25190) | 80211..80915 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KQ259_RS25195 (KQ259_25195) | 80973..81503 | - | 531 | Protein_95 | histidine-type phosphatase | - |
| KQ259_RS25200 (KQ259_25200) | 81625..82110 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| KQ259_RS25205 (KQ259_25205) | 82135..82620 | - | 486 | WP_001267177.1 | TlpA disulfide reductase family protein | - |
| KQ259_RS25210 (KQ259_25210) | 82607..83302 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| KQ259_RS25215 (KQ259_25215) | 83307..84437 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| KQ259_RS25220 (KQ259_25220) | 84427..85710 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| KQ259_RS25225 (KQ259_25225) | 85713..87092 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| KQ259_RS25230 (KQ259_25230) | 87196..87723 | - | 528 | WP_000178050.1 | iron transporter | - |
| KQ259_RS25235 (KQ259_25235) | 87764..89650 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| KQ259_RS25240 (KQ259_25240) | 89997..90758 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| KQ259_RS25245 (KQ259_25245) | 91038..91742 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KQ259_RS25250 (KQ259_25250) | 91864..92769 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| KQ259_RS25255 (KQ259_25255) | 92766..94004 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| KQ259_RS25260 (KQ259_25260) | 94004..94588 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| KQ259_RS25265 (KQ259_25265) | 95081..95845 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| KQ259_RS25270 (KQ259_25270) | 95963..96028 | - | 66 | Protein_110 | EAL domain-containing protein | - |
| KQ259_RS25275 (KQ259_25275) | 96072..96377 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| KQ259_RS25280 (KQ259_25280) | 96388..97593 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| KQ259_RS25285 (KQ259_25285) | 97749..97952 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| KQ259_RS25290 (KQ259_25290) | 98080..98919 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| KQ259_RS25295 (KQ259_25295) | 98913..99260 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| KQ259_RS25300 (KQ259_25300) | 99466..100254 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| KQ259_RS25305 (KQ259_25305) | 100385..100858 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| KQ259_RS25310 (KQ259_25310) | 101016..102029 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| KQ259_RS25615 | 102232..102339 | + | 108 | Protein_119 | EAL domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|