MGE detailed information
MGE type: Genomic_island MGE length: 23172 bp
Accession: NZ_CP076591 Location: 1999856..2023027 Organism: Erwinia amylovora isolate CP201142 Replicon: chromosome
Accession: NZ_CP076591 Location: 1999856..2023027 Organism: Erwinia amylovora isolate CP201142 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQH37_RS09165 (KQH37_09165) | 1995575..1998940 | + | 3366 | WP_004155194.1 | ATP-binding protein | - |
| KQH37_RS09170 (KQH37_09175) | 1999237..1999437 | - | 201 | Protein_1783 | transposase | - |
| KQH37_RS09175 (KQH37_09180) | 1999856..2000131 | - | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQH37_RS09180 (KQH37_09185) | 2000135..2000383 | - | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KQH37_RS09185 (KQH37_09190) | 2000480..2001313 | - | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| KQH37_RS09190 (KQH37_09195) | 2001426..2001746 | - | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| KQH37_RS09195 (KQH37_09200) | 2001783..2002106 | - | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KQH37_RS09200 (KQH37_09205) | 2002119..2002589 | - | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| KQH37_RS09205 (KQH37_09210) | 2002660..2003234 | - | 575 | Protein_1790 | DUF932 domain-containing protein | - |
| KQH37_RS09210 (KQH37_09215) | 2003459..2003701 | - | 243 | WP_004155184.1 | hypothetical protein | - |
| KQH37_RS09215 (KQH37_09220) | 2004911..2005108 | + | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| KQH37_RS09220 | 2005216..2005566 | + | 351 | WP_004155181.1 | hypothetical protein | - |
| KQH37_RS09225 (KQH37_09230) | 2006010..2007095 | + | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| KQH37_RS09230 (KQH37_09235) | 2007092..2008726 | + | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| KQH37_RS09235 (KQH37_09240) | 2008716..2010716 | + | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| KQH37_RS09240 (KQH37_09245) | 2010716..2011069 | + | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| KQH37_RS09245 (KQH37_09250) | 2011074..2012456 | + | 1383 | WP_169799831.1 | class I SAM-dependent methyltransferase | - |
| KQH37_RS09250 (KQH37_09255) | 2012661..2013482 | - | 822 | WP_004155174.1 | restriction endonuclease | - |
| KQH37_RS09255 (KQH37_09260) | 2013479..2018560 | - | 5082 | WP_004155173.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| KQH37_RS09260 (KQH37_09265) | 2018541..2019863 | - | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| KQH37_RS09265 (KQH37_09270) | 2019868..2021514 | - | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| KQH37_RS09270 (KQH37_09275) | 2021750..2023027 | - | 1278 | WP_004155169.1 | Prophage integrase IntA ; Integrase | Integrase |
| KQH37_RS09280 (KQH37_09285) | 2023648..2024157 | + | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| KQH37_RS09285 (KQH37_09290) | 2024328..2025827 | + | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| KQH37_RS09290 (KQH37_09295) | 2025829..2027106 | + | 1278 | WP_004155165.1 | DUF445 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0 |