MGE detailed information
MGE type: Genomic_island MGE length: 41886 bp
Accession: NZ_CP076404 Location: 2702850..2744735 Organism: Escherichia coli strain K-12 substr. AB1157 Replicon: chromosome
Accession: NZ_CP076404 Location: 2702850..2744735 Organism: Escherichia coli strain K-12 substr. AB1157 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KJY95_RS13130 (2698486) | 2698486..2700147 | + | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| KJY95_RS13135 (2700296) | 2700296..2700637 | + | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| KJY95_RS13140 (2700699) | 2700699..2700989 | - | 291 | WP_001117838.1 | RnfH family protein | - |
| KJY95_RS13145 (2700979) | 2700979..2701416 | - | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| KJY95_RS13150 (2701587) | 2701587..2702069 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| KJY95_RS13160 (2702850) | 2702850..2704091 | + | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| KJY95_RS13165 (2704335) | 2704335..2705291 | - | 957 | WP_000510827.1 | protein YfjH | - |
| KJY95_RS13170 (2705335) | 2705335..2705547 | + | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| KJY95_RS13175 (2705676) | 2705676..2707085 | + | 1410 | WP_000481742.1 | YfjI family protein | - |
| KJY95_RS13180 (2707238) | 2707238..2707864 | + | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| KJY95_RS13185 (2708042) | 2708042..2710231 | - | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| KJY95_RS13190 (2710228) | 2710228..2711844 | - | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| KJY95_RS13195 (2712204) | 2712204..2712467 | - | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| KJY95_RS13200 (2712609) | 2712609..2713682 | + | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| KJY95_RS13205 (2713675) | 2713675..2714046 | + | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| KJY95_RS13210 (2714401) | 2714401..2715264 | + | 864 | WP_000787597.1 | GTPase family protein | - |
| KJY95_RS13215 (2715356) | 2715356..2716177 | + | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| KJY95_RS13220 (2716394) | 2716394..2717095 | + | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| KJY95_RS13225 (2717136) | 2717136..2717372 | + | 237 | WP_001144029.1 | protein YpjK | - |
| KJY95_RS13230 (2717372) | 2717372..2717815 | + | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| KJY95_RS13235 (2717839) | 2717839..2718306 | + | 468 | WP_000702495.1 | protein YfjT | - |
| KJY95_RS13240 (2718693) | 2718693..2718845 | - | 153 | Protein_2590 | arsenate reductase | - |
| KJY95_RS13245 (2718858) | 2718858..2719867 | - | 1010 | Protein_2591 | arsenic transporter | - |
| KJY95_RS13250 (2720009) | 2720009..2721712 | + | 1704 | WP_001698958.1 | protein YfjW | - |
| KJY95_RS13255 (2722284) | 2722284..2722507 | + | 224 | Protein_2593 | DUF905 domain-containing protein | - |
| KJY95_RS13260 (2722610) | 2722610..2723068 | + | 459 | WP_000211841.1 | antirestriction protein | - |
| KJY95_RS13265 (2723077) | 2723077..2723559 | + | 483 | WP_001407480.1 | RadC family protein | - |
| KJY95_RS13270 (2723568) | 2723568..2723768 | + | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| KJY95_RS13275 (2723806) | 2723806..2724123 | + | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KJY95_RS13280 (2724144) | 2724144..2724473 | + | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| KJY95_RS13285 (2724837) | 2724837..2729417 | - | 4581 | WP_010723187.1 | putative autotransporter | VF |
| KJY95_RS13290 (2729482) | 2729482..2729601 | - | 120 | WP_001120794.1 | hypothetical protein | - |
| KJY95_RS13295 (2729825) | 2729825..2729983 | - | 159 | Protein_2601 | recombinase family protein | - |
| KJY95_RS13300 (2730329) | 2730329..2731702 | - | 1374 | Protein_2602 | DUF5507 domain-containing protein | - |
| KJY95_RS13310 (2733088) | 2733088..2735340 | + | 2253 | Protein_2603 | alpha-amylase family glycosyl hydrolase | - |
| KJY95_RS13315 (2735676) | 2735676..2736653 | + | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| KJY95_RS13320 (2736673) | 2736673..2737941 | + | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| KJY95_RS13325 (2737964) | 2737964..2739412 | + | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| KJY95_RS13330 (2739426) | 2739426..2740706 | + | 1281 | WP_001087611.1 | 4-aminobutyrate aminotransferase GabT | VF |
| KJY95_RS13335 (2740944) | 2740944..2742344 | + | 1401 | WP_001295173.1 | GABA permease | - |
| KJY95_RS13340 (2742365) | 2742365..2743027 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| KJY95_RS13345 (2743028) | 2743028..2743477 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| KJY95_RS13350 (2743561) | 2743561..2743719 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| KJY95_RS13355 (2743902) | 2743902..2744201 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| KJY95_RS13360 (2744211) | 2744211..2744735 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| KJY95_RS13365 (2744782) | 2744782..2745186 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| KJY95_RS13370 (2745855) | 2745855..2746304 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| KJY95_RS13375 (2746341) | 2746341..2746685 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| KJY95_RS13380 (2746837) | 2746837..2747166 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| KJY95_RS13385 (2747414) | 2747414..2747659 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| KJY95_RS13390 (2747656) | 2747656..2748066 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0.007 |