MGE detailed information
MGE type: Conjugative plasmid MGE length: 127140 bp
Accession: NZ_CP076271 Location: 1..127140 Organism: Escherichia coli strain Ceylon31 Replicon: plasmid pCeylon31IncF
Accession: NZ_CP076271 Location: 1..127140 Organism: Escherichia coli strain Ceylon31 Replicon: plasmid pCeylon31IncF
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A14_RS23730 (416) | 416..643 | - | 228 | Protein_1 | IS256 family transposase ISEic2 | Transposase |
| A7A14_RS23735 (732) | 732..1682 | - | 951 | Protein_2 | IS66 family transposase ISCro1 | Transposase |
| A7A14_RS23740 (1962) | 1962..2156 | + | 195 | Protein_3 | IS66 family transposase ISEc49 | Transposase |
| A7A14_RS23745 (2143) | 2143..2523 | + | 381 | WP_040089119.1 | IS66 family transposase ISEc49 | Transposase |
| A7A14_RS23750 (2566) | 2566..4149 | + | 1584 | WP_160519860.1 | IS66 family transposase ISEc49 | Transposase |
| A7A14_RS23755 (4636) | 4636..5274 | - | 639 | WP_040100185.1 | ParB N-terminal domain-containing protein | - |
| A7A14_RS23760 (5259) | 5259..6488 | - | 1230 | WP_040089139.1 | phosphoadenosine phosphosulfate reductase | - |
| A7A14_RS23765 (7142) | 7142..7981 | - | 840 | WP_072146465.1 | HTH-type transcriptional activator RhaR | VF |
| A7A14_RS23770 (7995) | 7995..8873 | - | 879 | WP_137499830.1 | hypothetical protein | - |
| A7A14_RS23775 (8908) | 8908..10053 | - | 1146 | WP_061322822.1 | DUF4056 domain-containing protein | - |
| A7A14_RS23780 (10146) | 10146..10397 | - | 252 | WP_040100188.1 | hypothetical protein | - |
| A7A14_RS23785 (10595) | 10595..11515 | - | 921 | WP_137550926.1 | hypothetical protein | - |
| A7A14_RS23790 (11554) | 11554..12456 | - | 903 | WP_176218187.1 | VirK/YbjX family protein | - |
| A7A14_RS23795 (12577) | 12577..13674 | - | 1098 | WP_158126911.1 | glycosyltransferase family 4 protein | - |
| A7A14_RS23800 (13684) | 13684..14514 | - | 831 | WP_057698510.1 | polysaccharide deacetylase family protein | - |
| A7A14_RS23805 (14699) | 14699..15604 | - | 906 | WP_160393725.1 | Right origin-binding protein | VF |
| A7A14_RS23810 (15904) | 15904..16818 | - | 915 | WP_170994298.1 | hypothetical protein | VF |
| A7A14_RS23815 (16862) | 16862..17242 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| A7A14_RS23820 (17239) | 17239..17586 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| A7A14_RS23825 (17636) | 17636..19174 | + | 1539 | WP_257122489.1 | IS66 family transposase ISEc8 | Transposase |
| A7A14_RS23830 (19692) | 19692..20912 | + | 1221 | WP_000040077.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| A7A14_RS23835 (20905) | 20905..25659 | + | 4755 | WP_257122490.1 | putative autotransporter | VF |
| A7A14_RS23840 (25958) | 25958..26236 | + | 279 | WP_042054335.1 | hypothetical protein | - |
| A7A14_RS23845 (26410) | 26410..26686 | - | 277 | Protein_24 | IS3 family transposase IS1351 | Transposase |
| A7A14_RS23850 (27094) | 27094..27930 | - | 837 | WP_000149836.1 | Right origin-binding protein | VF |
| A7A14_RS23855 (28245) | 28245..29241 | - | 997 | Protein_26 | IS3 family transposase | - |
| A7A14_RS23860 (29643) | 29643..30657 | + | 1015 | Protein_27 | integrase core domain-containing protein | - |
| A7A14_RS23870 (31459) | 31459..32406 | + | 948 | WP_137546097.1 | DMT family transporter | - |
| A7A14_RS23875 (32747) | 32747..32902 | + | 156 | Protein_29 | IS110 family transposase | - |
| A7A14_RS23880 (33298) | 33298..33549 | - | 252 | WP_071889275.1 | HTH domain-containing protein | - |
| A7A14_RS23885 (34899) | 34899..35756 | - | 858 | WP_000131011.1 | incFII family plasmid replication initiator RepA | - |
| A7A14_RS23890 (35749) | 35749..35823 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| A7A14_RS23895 (35872) | 35872..35997 | + | 126 | WP_094259391.1 | replication protein RepA | - |
| A7A14_RS23900 (36070) | 36070..36318 | - | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| A7A14_RS23905 (36602) | 36602..36751 | - | 150 | WP_001300273.1 | Hok/Gef family protein | Toxin Detail |
| - (36795) | 36795..36856 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (36795) | 36795..36856 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (36795) | 36795..36856 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (36795) | 36795..36856 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| A7A14_RS23910 (37031) | 37031..37165 | - | 135 | WP_001058542.1 | hypothetical protein | - |
| A7A14_RS23915 (37516) | 37516..37977 | - | 462 | WP_000760078.1 | thermonuclease family protein | - |
| A7A14_RS23920 (38720) | 38720..38923 | - | 204 | WP_040073114.1 | hypothetical protein | - |
| A7A14_RS23925 (39078) | 39078..39635 | - | 558 | WP_000139319.1 | fertility inhibition protein FinO | - |
| A7A14_RS23930 (39738) | 39738..40598 | - | 861 | WP_000704529.1 | putative protein YcjY | VF |
| A7A14_RS23935 (40657) | 40657..41397 | - | 741 | WP_094259392.1 | conjugal transfer pilus acetylase TraX | - |
| A7A14_RS23940 (41417) | 41417..46687 | - | 5271 | WP_137546095.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| A7A14_RS23945 (46769) | 46769..46996 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| A7A14_RS23950 (46996) | 46996..47394 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A7A14_RS23955 (47403) | 47403..49628 | - | 2226 | WP_257122491.1 | type IV conjugative transfer system coupling protein TraD | - |
| A7A14_RS23960 (49881) | 49881..50591 | - | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| A7A14_RS23965 (50644) | 50644..51141 | - | 498 | WP_137546094.1 | surface exclusion protein | - |
| A7A14_RS23970 (51166) | 51166..53985 | - | 2820 | WP_257122492.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| A7A14_RS23975 (53982) | 53982..55355 | - | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| A7A14_RS23980 (55342) | 55342..55734 | - | 393 | WP_040100295.1 | F-type conjugal transfer protein TrbF | - |
| A7A14_RS23985 (55721) | 55721..56062 | - | 342 | WP_001406994.1 | P-type conjugative transfer protein TrbJ | - |
| A7A14_RS23990 (55992) | 55992..56537 | - | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A7A14_RS23995 (56524) | 56524..56808 | - | 285 | WP_000624103.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A7A14_RS24000 (57166) | 57166..57513 | - | 348 | WP_001287908.1 | conjugal transfer protein TrbA | - |
| A7A14_RS24005 (57529) | 57529..58272 | - | 744 | WP_257122493.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A7A14_RS24010 (58265) | 58265..58525 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| A7A14_RS24015 (58552) | 58552..60360 | - | 1809 | WP_040100300.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A7A14_RS24020 (60357) | 60357..60995 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A7A14_RS24025 (61004) | 61004..61996 | - | 993 | WP_040100302.1 | conjugal transfer pilus assembly protein TraU | - |
| A7A14_RS24030 (61993) | 61993..62625 | - | 633 | WP_040100303.1 | type-F conjugative transfer system protein TraW | - |
| A7A14_RS24035 (62622) | 62622..63002 | - | 381 | WP_040100306.1 | type-F conjugative transfer system protein TrbI | - |
| A7A14_RS24040 (63086) | 63086..64192 | + | 1107 | WP_257122494.1 | hypothetical protein | - |
| A7A14_RS24045 (64574) | 64574..67216 | - | 2643 | WP_096934518.1 | type IV secretion system protein TraC | - |
| A7A14_RS24050 (67376) | 67376..67597 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| A7A14_RS24055 (67732) | 67732..68247 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A7A14_RS24060 (68244) | 68244..68495 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| A7A14_RS24065 (68507) | 68507..68704 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| A7A14_RS24070 (68691) | 68691..69281 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| A7A14_RS24075 (69271) | 69271..70698 | - | 1428 | WP_040100311.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| A7A14_RS24080 (70698) | 70698..71426 | - | 729 | WP_001230813.1 | type-F conjugative transfer system secretin TraK | - |
| A7A14_RS24085 (71413) | 71413..71979 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| A7A14_RS24090 (72001) | 72001..72312 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| A7A14_RS24095 (72327) | 72327..72692 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| A7A14_RS24100 (72726) | 72726..72953 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| A7A14_RS24105 (73047) | 73047..73733 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| A7A14_RS24110 (73923) | 73923..74306 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| A7A14_RS24115 (74583) | 74583..75230 | + | 648 | WP_122990291.1 | hypothetical protein | VF |
| A7A14_RS24120 (75526) | 75526..76347 | - | 822 | WP_032257923.1 | DUF932 domain-containing protein | - |
| A7A14_RS24125 (76466) | 76466..76752 | - | 287 | Protein_79 | hypothetical protein | - |
| A7A14_RS24130 (76777) | 76777..76983 | - | 207 | WP_034174079.1 | hypothetical protein | - |
| A7A14_RS24135 (77053) | 77053..77349 | + | 297 | Protein_81 | hypothetical protein | - |
| A7A14_RS24140 (77650) | 77650..77775 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| A7A14_RS24145 (77717) | 77717..77866 | - | 150 | Protein_83 | DUF5431 family protein | - |
| - (77873) | 77873..78071 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (77873) | 77873..78071 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (77873) | 77873..78071 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (77873) | 77873..78071 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| A7A14_RS24150 (78040) | 78040..78802 | - | 763 | Protein_84 | plasmid SOS inhibition protein A | - |
| A7A14_RS24155 (78799) | 78799..79233 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| A7A14_RS24160 (79288) | 79288..81246 | - | 1959 | WP_160521604.1 | ParB/RepB/Spo0J family partition protein | - |
| A7A14_RS24165 (81312) | 81312..81545 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| A7A14_RS24170 (81602) | 81602..82141 | - | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| A7A14_RS24175 (82459) | 82459..82968 | + | 510 | WP_071600123.1 | hypothetical protein | - |
| A7A14_RS24180 (82938) | 82938..83129 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| A7A14_RS24185 (83129) | 83129..83548 | - | 420 | WP_000271711.1 | DUF1380 family protein | - |
| A7A14_RS24190 (83595) | 83595..84020 | - | 426 | WP_001198954.1 | antirestriction protein | - |
| A7A14_RS24195 (84437) | 84437..85207 | - | 771 | WP_044863077.1 | hypothetical protein | - |
| A7A14_RS24200 (85252) | 85252..85719 | - | 468 | WP_250694131.1 | DUF1380 family protein | - |
| A7A14_RS24205 (85700) | 85700..85921 | - | 222 | WP_257122486.1 | hypothetical protein | - |
| A7A14_RS24210 (85922) | 85922..86605 | - | 684 | WP_032219114.1 | DNA methylase | - |
| A7A14_RS24215 (86682) | 86682..86993 | - | 312 | WP_032219116.1 | hypothetical protein | - |
| A7A14_RS24220 (86990) | 86990..87891 | - | 902 | Protein_98 | DUF1281 domain-containing protein | - |
| A7A14_RS24225 (88758) | 88758..89729 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| A7A14_RS24230 (89729) | 89729..90895 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| A7A14_RS24235 (91483) | 91483..92238 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| A7A14_RS24240 (92960) | 92960..93766 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| A7A14_RS24245 (93767) | 93767..94072 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A7A14_RS24250 (94074) | 94074..94292 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A7A14_RS24255 (94925) | 94925..95122 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| A7A14_RS24260 (95119) | 95119..95403 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| A7A14_RS24265 (95423) | 95423..96556 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| A7A14_RS24270 (96819) | 96819..99938 | - | 3120 | WP_257122487.1 | hypothetical protein | - |
| A7A14_RS24275 (100244) | 100244..100474 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| A7A14_RS24280 (100471) | 100471..100887 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A7A14_RS24285 (101049) | 101049..103187 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| A7A14_RS24290 (103541) | 103541..103798 | + | 258 | WP_000371887.1 | hypothetical protein | - |
| A7A14_RS24295 (103798) | 103798..104388 | + | 591 | WP_000194548.1 | hypothetical protein | - |
| A7A14_RS24300 (104406) | 104406..104753 | - | 348 | WP_000142443.1 | DUF6404 family protein | - |
| A7A14_RS24305 (104882) | 104882..105217 | + | 336 | WP_057698418.1 | colicin E1 family microcin immunity protein | - |
| A7A14_RS24310 (105239) | 105239..105547 | - | 309 | WP_057698417.1 | colicin-like pore-forming protein | - |
| A7A14_RS24315 (105593) | 105593..105745 | - | 153 | WP_244566948.1 | IS3 family transposase ISEcl1 | Transposase |
| A7A14_RS24320 (105840) | 105840..106153 | - | 314 | Protein_118 | IS3 family transposase ISEcl1 | Transposase |
| A7A14_RS24325 (106266) | 106266..107327 | - | 1062 | WP_257122488.1 | hypothetical protein | - |
| A7A14_RS24330 (107502) | 107502..107833 | - | 332 | Protein_120 | IS3 family transposase | - |
| A7A14_RS24335 (108506) | 108506..109483 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| A7A14_RS24340 (109768) | 109768..110508 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| A7A14_RS24345 (110629) | 110629..110763 | - | 135 | Protein_123 | serine/threonine protein kinase | - |
| A7A14_RS24350 (112170) | 112170..112862 | - | 693 | WP_040089280.1 | Chaperone protein FaeE | VF |
| A7A14_RS24355 (112855) | 112855..115263 | - | 2409 | WP_137499811.1 | Outer membrane usher protein FimD | VF |
| A7A14_RS24360 (115462) | 115462..115986 | - | 525 | WP_160393726.1 | hypothetical protein | VF |
| A7A14_RS24365 (116751) | 116751..117338 | - | 588 | WP_040089288.1 | hypothetical protein | - |
| A7A14_RS24370 (118650) | 118650..119039 | + | 390 | WP_040088945.1 | hypothetical protein | - |
| A7A14_RS24375 (119367) | 119367..120185 | - | 819 | WP_040100202.1 | hypothetical protein | - |
| A7A14_RS24380 (120635) | 120635..121330 | - | 696 | WP_040100218.1 | Chaperone protein FaeE | VF |
| A7A14_RS24385 (122390) | 122390..123427 | + | 1038 | WP_137499813.1 | hypothetical protein | - |
| A7A14_RS24390 (123746) | 123746..124694 | - | 949 | Protein_132 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|