MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP075116 Location: 1006475..1006651 Organism: Salmonella enterica subsp. enterica serovar Stanleyville strain CFSAN059881 Replicon: chromosome
Accession: NZ_CP075116 Location: 1006475..1006651 Organism: Salmonella enterica subsp. enterica serovar Stanleyville strain CFSAN059881 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CCO40_RS04785 (1001588) | 1001588..1001968 | + | 381 | WP_052932524.1 | DUF4440 domain-containing protein | - |
CCO40_RS04790 (1002024) | 1002024..1004591 | - | 2568 | WP_001005802.1 | DNA mismatch repair protein MutS | - |
CCO40_RS04795 (1004750) | 1004750..1005271 | + | 522 | WP_094889101.1 | cytoplasmic protein | - |
CCO40_RS04800 (1005443) | 1005443..1006099 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
CCO40_RS04805 (1006446) | 1006446..1006651 | + | 206 | Protein_943 | IS5 family transposase ISEcl3 | Transposase |
CCO40_RS04810 (1006724) | 1006724..1007251 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
CCO40_RS04815 (1007248) | 1007248..1007538 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
CCO40_RS04820 (1007808) | 1007808..1007986 | - | 179 | Protein_946 | IS3 family transposase | - |
CCO40_RS04825 (1008227) | 1008227..1008553 | + | 327 | WP_000393302.1 | hypothetical protein | - |
CCO40_RS04830 (1008826) | 1008826..1009173 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
CCO40_RS04835 (1009158) | 1009158..1009607 | - | 450 | WP_000381617.1 | hypothetical protein | - |
CCO40_RS04840 (1010039) | 1010039..1010482 | - | 444 | WP_094889102.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
CCO40_RS04845 (1010939) | 1010939..1011589 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |