MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP074663 Location: 848777..860102 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081 Replicon: chromosome
Accession: NZ_CP074663 Location: 848777..860102 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG493_RS04070 (844223) | 844223..845321 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| BG493_RS04075 (845331) | 845331..846848 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| BG493_RS04080 (846924) | 846924..847469 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| BG493_RS04085 (847734) | 847734..848492 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| BG493_RS04095 (848777) | 848777..849583 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| BG493_RS04100 (849858) | 849858..850109 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| BG493_RS04105 (850286) | 850286..850513 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| BG493_RS04110 (850513) | 850513..850911 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| BG493_RS04115 (851717) | 851717..852253 | + | 537 | WP_001038506.1 | hypothetical protein | VF |
| BG493_RS04120 (852300) | 852300..852932 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| BG493_RS04125 (853651) | 853651..854235 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| BG493_RS04130 (854355) | 854355..856844 | + | 2490 | WP_000705483.1 | hypothetical protein | VF |
| BG493_RS04135 (856885) | 856885..857628 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| BG493_RS04140 (857625) | 857625..858701 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| BG493_RS04145 (858845) | 858845..859357 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| BG493_RS04150 (859344) | 859344..860102 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| BG493_RS04155 (860312) | 860312..861208 | - | 897 | WP_000503673.1 | nickel/cobalt efflux protein RcnA | - |
| BG493_RS04160 (861330) | 861330..861602 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| BG493_RS04165 (861633) | 861633..862862 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| BG493_RS04170 (863004) | 863004..863459 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| BG493_RS04175 (863563) | 863563..864426 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |