MGE detailed information
MGE type: Prophage MGE length: 38310 bp
Accession: NZ_CP074092 Location: 1935544..1973853 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SO_8752_Stm Replicon: chromosome
Accession: NZ_CP074092 Location: 1935544..1973853 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SO_8752_Stm Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFK83_RS09410 () | 1931273..1931743 | + | 471 | WP_000156281.1 | DUF986 family protein | - |
| KFK83_RS09415 () | 1932141..1932707 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| KFK83_RS09420 () | 1932704..1933513 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| KFK83_RS09425 () | 1933579..1935324 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| KFK83_RS09430 () | 1935544..1935753 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| KFK83_RS09435 () | 1935766..1935909 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| KFK83_RS09440 () | 1936558..1936845 | - | 288 | WP_001000660.1 | YebO family protein | - |
| KFK83_RS09445 () | 1936916..1937059 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| KFK83_RS09450 () | 1937217..1937456 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| KFK83_RS09455 () | 1937668..1938459 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| KFK83_RS09460 () | 1938635..1940008 | + | 1374 | WP_000416127.1 | MFS transporter | - |
| KFK83_RS09465 () | 1940056..1940937 | - | 882 | WP_000984498.1 | protease HtpX | - |
| KFK83_RS09470 () | 1941131..1943179 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| KFK83_RS09475 () | 1943199..1943885 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| KFK83_RS09480 () | 1943983..1944480 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| KFK83_RS09485 () | 1944609..1945892 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| KFK83_RS09490 () | 1945861..1948494 | + | 2634 | WP_001535256.1 | hypothetical protein | VF |
| KFK83_RS09495 () | 1948572..1950011 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| KFK83_RS09500 () | 1950129..1950365 | + | 237 | WP_024131108.1 | YebV family protein | - |
| KFK83_RS09505 () | 1950476..1950667 | + | 192 | WP_000457836.1 | YebW family protein | - |
| KFK83_RS09510 () | 1950686..1951336 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| KFK83_RS09515 () | 1951560..1951724 | - | 165 | WP_001134856.1 | membrane protein | - |
| KFK83_RS09520 () | 1952009..1952731 | - | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| KFK83_RS09525 () | 1953415..1953810 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| KFK83_RS09530 () | 1954140..1954616 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| KFK83_RS09535 () | 1955004..1955423 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| KFK83_RS09540 () | 1955793..1956062 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| KFK83_RS09545 () | 1956228..1956368 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| KFK83_RS09550 () | 1956514..1957708 | - | 1195 | Protein_1873 | IS256 family transposase IS285 | Transposase |
| KFK83_RS09555 () | 1957778..1958200 | + | 423 | Protein_1874 | hypothetical protein ; Integrase | Integrase |
| KFK83_RS09560 () | 1959504..1960418 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| KFK83_RS09565 () | 1960551..1960709 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| KFK83_RS09570 () | 1960719..1961333 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| KFK83_RS24090 () | 1961660..1961827 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| KFK83_RS24225 () | 1961821..1961967 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| KFK83_RS09585 () | 1962481..1962606 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| KFK83_RS24095 () | 1962606..1962786 | + | 181 | Protein_1881 | IS3 family transposase | - |
| KFK83_RS09590 () | 1963176..1963376 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| KFK83_RS09595 () | 1963473..1963943 | - | 471 | Protein_1883 | tail fiber assembly protein | - |
| KFK83_RS09600 () | 1963953..1964297 | - | 345 | Protein_1884 | macro domain-containing protein | - |
| KFK83_RS09605 () | 1964512..1964772 | - | 261 | Protein_1885 | DUF1441 family protein | - |
| KFK83_RS09610 () | 1964827..1965015 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| KFK83_RS09615 () | 1965080..1965247 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| KFK83_RS09620 () | 1965504..1966037 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| KFK83_RS09625 () | 1966091..1966282 | - | 192 | Protein_1889 | glycoside hydrolase family 19 protein | - |
| KFK83_RS24100 () | 1966271..1966732 | + | 462 | Protein_1890 | DNA breaking-rejoining protein | - |
| KFK83_RS09635 () | 1966996..1967919 | + | 924 | Protein_1891 | hypothetical protein ; Integrase | Integrase |
| - | 1968048..1968193 | + | 146 | - | - | Antitoxin Detail |
| - | 1968050..1968153 | - | 104 | - | - | Toxin Detail |
| KFK83_RS09640 () | 1968293..1968646 | - | 354 | WP_000722368.1 | YebY family protein | - |
| KFK83_RS09645 () | 1968663..1969538 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| KFK83_RS09650 () | 1969539..1969913 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| KFK83_RS09655 () | 1970051..1970281 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| KFK83_RS09660 () | 1970389..1971045 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| KFK83_RS09665 () | 1971069..1971767 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| KFK83_RS09670 () | 1971802..1973853 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| KFK83_RS09675 () | 1974066..1974725 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| KFK83_RS09680 () | 1974819..1975172 | - | 354 | WP_001042119.1 | protein YebF | - |
| KFK83_RS09685 () | 1975240..1975530 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| KFK83_RS09690 () | 1975661..1976839 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| KFK83_RS09695 () | 1976939..1977580 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |