MGE detailed information
MGE type: Conjugative plasmid MGE length: 96684 bp
Accession: NZ_CP074034 Location: 1..96684 Organism: Escherichia coli strain PI7 Replicon: plasmid pYLPI7a
Accession: NZ_CP074034 Location: 1..96684 Organism: Escherichia coli strain PI7 Replicon: plasmid pYLPI7a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU70_RS23910 (1) | 1..858 | + | 858 | WP_257201723.1 | incFII family plasmid replication initiator RepA | - |
| KFU70_RS23915 (1772) | 1772..2011 | + | 240 | WP_094320496.1 | hypothetical protein | - |
| KFU70_RS23920 (2159) | 2159..3679 | - | 1521 | WP_001301397.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| KFU70_RS23930 (4434) | 4434..4535 | - | 102 | Protein_4 | universal stress protein | - |
| KFU70_RS23935 (4570) | 4570..5214 | - | 645 | Protein_5 | STAS domain-containing protein | - |
| KFU70_RS23940 (5291) | 5291..5641 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| KFU70_RS23945 (5844) | 5844..6857 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| KFU70_RS23950 (7014) | 7014..7487 | + | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| KFU70_RS23955 (7580) | 7580..8418 | + | 839 | Protein_9 | Streptomycin 3''-adenylyltransferase | ARG |
| KFU70_RS23960 (8535) | 8535..8882 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| KFU70_RS23965 (8876) | 8876..9715 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| KFU70_RS23970 (9843) | 9843..10046 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| KFU70_RS23975 (10202) | 10202..11407 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| KFU70_RS23980 (11417) | 11417..11722 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| KFU70_RS23985 (11766) | 11766..11831 | + | 66 | Protein_15 | EAL domain-containing protein | - |
| KFU70_RS23990 (11949) | 11949..12713 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| KFU70_RS23995 (13206) | 13206..13790 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| KFU70_RS24000 (13790) | 13790..15028 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| KFU70_RS24005 (15025) | 15025..15930 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| KFU70_RS24010 (16052) | 16052..16756 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KFU70_RS24015 (16823) | 16823..17439 | - | 617 | Protein_21 | transposase | - |
| KFU70_RS24020 (17833) | 17833..18488 | + | 656 | Protein_22 | Pentapeptide repeat protein | ARG |
| KFU70_RS24025 (18806) | 18806..19233 | - | 428 | Protein_23 | recombinase family protein | - |
| KFU70_RS24030 (19265) | 19265..20656 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| KFU70_RS24035 (20693) | 20693..21265 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| KFU70_RS24040 (21402) | 21402..21947 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| KFU70_RS24045 (22110) | 22110..22352 | + | 243 | WP_000844627.1 | transposase | - |
| KFU70_RS24050 (22384) | 22384..23034 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| KFU70_RS24055 (23140) | 23140..24339 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| KFU70_RS24060 (24371) | 24371..25255 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| KFU70_RS24065 (25393) | 25393..25755 | - | 363 | WP_223809875.1 | isochorismatase family protein | - |
| KFU70_RS24070 (25789) | 25789..27540 | + | 1752 | Protein_32 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KFU70_RS24075 (27650) | 27650..27928 | + | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | - |
| KFU70_RS24080 (27974) | 27974..28822 | + | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
| KFU70_RS24085 (28939) | 28939..29421 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| KFU70_RS24090 (29723) | 29723..30070 | + | 348 | WP_000142450.1 | DUF6404 family protein | - |
| KFU70_RS24095 (30088) | 30088..30273 | - | 186 | Protein_37 | hypothetical protein | - |
| KFU70_RS24100 (30499) | 30499..34314 | + | 3816 | WP_223364258.1 | hypothetical protein | - |
| KFU70_RS24105 (34870) | 34870..35088 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KFU70_RS24110 (35090) | 35090..35395 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KFU70_RS24115 (35396) | 35396..36202 | + | 807 | WP_000016970.1 | site-specific integrase | - |
| KFU70_RS24120 (36924) | 36924..37679 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| KFU70_RS24125 (38267) | 38267..39433 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| KFU70_RS24130 (39433) | 39433..40404 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| KFU70_RS24135 (41142) | 41142..42044 | + | 903 | WP_077632859.1 | DUF1281 domain-containing protein | - |
| KFU70_RS24140 (42041) | 42041..42352 | + | 312 | WP_032141194.1 | hypothetical protein | - |
| KFU70_RS24145 (42428) | 42428..43111 | + | 684 | WP_000085871.1 | DNA methylase | - |
| KFU70_RS24150 (43112) | 43112..43333 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| KFU70_RS24155 (43314) | 43314..43781 | + | 468 | WP_023148244.1 | DUF1380 family protein | - |
| KFU70_RS24160 (43826) | 43826..44596 | + | 771 | WP_001006209.1 | hypothetical protein | - |
| KFU70_RS24165 (45013) | 45013..45438 | + | 426 | WP_001198927.1 | antirestriction protein | - |
| KFU70_RS24170 (45485) | 45485..45907 | + | 423 | WP_000271751.1 | DUF1380 family protein | - |
| KFU70_RS24175 (45904) | 45904..46095 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| KFU70_RS24180 (47130) | 47130..47360 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| KFU70_RS24185 (47412) | 47412..48773 | + | 1362 | WP_000170724.1 | DUF3560 domain-containing protein | - |
| KFU70_RS24190 (48821) | 48821..49384 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| KFU70_RS24195 (49410) | 49410..49625 | + | 216 | WP_015059639.1 | hypothetical protein | - |
| KFU70_RS24200 (49535) | 49535..49795 | + | 261 | WP_072250151.1 | hypothetical protein | - |
| KFU70_RS24205 (50036) | 50036..50242 | + | 207 | WP_024190028.1 | hypothetical protein | - |
| KFU70_RS24210 (50268) | 50268..50720 | + | 453 | WP_000290843.1 | single-stranded DNA-binding protein | - |
| KFU70_RS24215 (50783) | 50783..51016 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| KFU70_RS24220 (51082) | 51082..53040 | + | 1959 | Protein_62 | ParB/RepB/Spo0J family partition protein | - |
| KFU70_RS24225 (53095) | 53095..53529 | + | 435 | WP_000845932.1 | conjugation system SOS inhibitor PsiB | - |
| KFU70_RS24230 (53526) | 53526..54288 | + | 763 | Protein_64 | plasmid SOS inhibition protein A | - |
| KFU70_RS24235 (54257) | 54257..54445 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (54257) | 54257..54454 | + | 198 | NuclAT_0 | - | - |
| - (54257) | 54257..54454 | + | 198 | NuclAT_0 | - | - |
| - (54257) | 54257..54454 | + | 198 | NuclAT_0 | - | - |
| - (54257) | 54257..54454 | + | 198 | NuclAT_0 | - | - |
| KFU70_RS24240 (54502) | 54502..55871 | + | 1370 | WP_085947770.1 | IS3-like element IS150 family transposase | - |
| - (55896) | 55896..55927 | + | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (55896) | 55896..55927 | + | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (55896) | 55896..55927 | + | 32 | NuclAT_1 | - | Antitoxin Detail |
| - (55896) | 55896..55927 | + | 32 | NuclAT_1 | - | Antitoxin Detail |
| KFU70_RS24245 (55913) | 55913..56062 | + | 150 | Protein_67 | plasmid maintenance protein Mok | - |
| KFU70_RS24250 (56004) | 56004..56129 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| KFU70_RS24255 (56576) | 56576..56749 | - | 174 | Protein_69 | hypothetical protein | - |
| KFU70_RS24260 (56819) | 56819..57025 | + | 207 | WP_015059635.1 | hypothetical protein | - |
| KFU70_RS24265 (57050) | 57050..57336 | + | 287 | Protein_71 | hypothetical protein | - |
| KFU70_RS24270 (57456) | 57456..58277 | + | 822 | WP_001234423.1 | DUF932 domain-containing protein | - |
| KFU70_RS24275 (58574) | 58574..59176 | - | 603 | WP_000243710.1 | hypothetical protein | VF |
| KFU70_RS24280 (59497) | 59497..59880 | + | 384 | WP_001151528.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KFU70_RS24285 (60067) | 60067..60756 | + | 690 | WP_000283383.1 | conjugal transfer transcriptional regulator TraJ | - |
| KFU70_RS24290 (60849) | 60849..61250 | + | 402 | WP_223195105.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| KFU70_RS24295 (61283) | 61283..61645 | + | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| KFU70_RS24300 (61650) | 61650..61961 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| KFU70_RS24305 (61983) | 61983..62549 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| KFU70_RS24310 (62536) | 62536..63264 | + | 729 | WP_001230805.1 | type-F conjugative transfer system secretin TraK | - |
| KFU70_RS24315 (63264) | 63264..64715 | + | 1452 | WP_000146659.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KFU70_RS24320 (64705) | 64705..65265 | + | 561 | WP_000896605.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KFU70_RS24325 (65252) | 65252..65572 | + | 321 | WP_001057304.1 | conjugal transfer protein TrbD | - |
| KFU70_RS24330 (65565) | 65565..65816 | + | 252 | WP_001038331.1 | conjugal transfer protein TrbG | - |
| KFU70_RS24335 (65813) | 65813..66328 | + | 516 | WP_000809885.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KFU70_RS24340 (66463) | 66463..66684 | + | 222 | WP_001278686.1 | conjugal transfer protein TraR | - |
| KFU70_RS24345 (66844) | 66844..69471 | + | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| KFU70_RS24350 (69468) | 69468..69854 | + | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| KFU70_RS24355 (69851) | 69851..70483 | + | 633 | WP_001203750.1 | type-F conjugative transfer system protein TraW | - |
| KFU70_RS24360 (70480) | 70480..71472 | + | 993 | WP_000830835.1 | conjugal transfer pilus assembly protein TraU | - |
| KFU70_RS24365 (71481) | 71481..72119 | + | 639 | WP_000777690.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KFU70_RS24370 (72116) | 72116..73924 | + | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KFU70_RS24375 (73951) | 73951..74208 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| KFU70_RS24380 (74201) | 74201..74944 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KFU70_RS24385 (74960) | 74960..75307 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| KFU70_RS24390 (75309) | 75309..75623 | - | 315 | WP_000415566.1 | protein ArtA | - |
| KFU70_RS24395 (75704) | 75704..75988 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KFU70_RS24400 (75975) | 75975..76520 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KFU70_RS24405 (76450) | 76450..76791 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| KFU70_RS24410 (76778) | 76778..77158 | + | 381 | WP_001366201.1 | F-type conjugal transfer protein TrbF | - |
| KFU70_RS24415 (77158) | 77158..78531 | + | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| KFU70_RS24420 (78528) | 78528..81350 | + | 2823 | WP_001007016.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KFU70_RS24425 (81366) | 81366..81863 | + | 498 | WP_000605859.1 | entry exclusion protein | - |
| KFU70_RS24430 (81916) | 81916..82626 | + | 711 | WP_230133085.1 | conjugal transfer complement resistance protein TraT | - |
| KFU70_RS24435 (82879) | 82879..85032 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| KFU70_RS24440 (85041) | 85041..85439 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| KFU70_RS24445 (85439) | 85439..85666 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| KFU70_RS24450 (85748) | 85748..91018 | + | 5271 | WP_000986969.1 | Multifunctional conjugation protein TraI | Relaxase |
| KFU70_RS24455 (91038) | 91038..91784 | + | 747 | WP_000205745.1 | conjugal transfer pilus acetylase TraX | - |
| KFU70_RS24460 (91843) | 91843..92703 | + | 861 | WP_000704512.1 | putative protein YcjY | VF |
| KFU70_RS24465 (92806) | 92806..93363 | + | 558 | WP_000139312.1 | fertility inhibition protein FinO | - |
| KFU70_RS24470 (93518) | 93518..93721 | + | 204 | WP_001327131.1 | hypothetical protein | - |
| KFU70_RS24475 (94464) | 94464..94925 | + | 462 | WP_000760078.1 | thermonuclease family protein | - |
| - (95585) | 95585..95646 | - | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (95585) | 95585..95646 | - | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (95585) | 95585..95646 | - | 62 | NuclAT_2 | - | Antitoxin Detail |
| - (95585) | 95585..95646 | - | 62 | NuclAT_2 | - | Antitoxin Detail |
| KFU70_RS24480 (95690) | 95690..95839 | + | 150 | WP_001300273.1 | Hok/Gef family protein | Toxin Detail |
| KFU70_RS24485 (96123) | 96123..96371 | + | 249 | WP_000083835.1 | replication regulatory protein RepA | - |
| KFU70_RS24490 (96444) | 96444..96569 | - | 126 | WP_015059569.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|