NZ_CP0739631..133598

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 133598 bp
Accession: NZ_CP073963        Location: 1..133598         Organism: Escherichia coli strain MB31       Replicon: plasmid pYLMB31a


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KFU79_RS23310 (1) 1..978 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
KFU79_RS23315 (1263) 1263..2003 - 741 WP_001066953.1 tyrosine-type recombinase/integrase -
KFU79_RS23320 (2124) 2124..2312 - 189 WP_001309252.1 hypothetical protein -
KFU79_RS23325 (2679) 2679..3848 + 1170 WP_001072358.1 hypothetical protein -
KFU79_RS23330 (4074) 4074..4249 - 176 Protein_4 IS3 family transposase -
KFU79_RS23335 (4695) 4695..4967 - 273 WP_001322642.1 Major pilu subunit operon regulatory protein PapB VF
KFU79_RS23340 (5504) 5504..5928 - 425 Protein_6 IS3 family transposase IS2 Transposase
KFU79_RS23345 (6210) 6210..8180 + 1971 WP_001496335.1 Hemin receptor VF
KFU79_RS23350 (8187) 8187..8978 + 792 WP_000977394.1 DUF4198 domain-containing protein -
KFU79_RS23355 (9041) 9041..9649 - 609 Protein_9 IS66 family transposase ISEc22 Transposase
KFU79_RS23360 (9717) 9717..10499 - 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
KFU79_RS23365 (10496) 10496..11518 - 1023 WP_000255956.1 IS21 family transposase IS100kyp Transposase
KFU79_RS23370 (11604) 11604..12549 - 946 Protein_12 IS66 family transposase ISEc8 Transposase
KFU79_RS23375 (12598) 12598..12972 - 375 WP_024193849.1 IS66 family insertion sequence element accessory protein TnpB -
KFU79_RS23380 (12997) 12997..13701 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
KFU79_RS23385 (13752) 13752..14636 - 885 Protein_15 IS91 family transposase ISAzo26 Transposase
KFU79_RS23390 (14794) 14794..15267 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
KFU79_RS23395 (15389) 15389..16086 + 698 WP_095033700.1 IS1 family transposase IS1R Transposase
KFU79_RS23400 (16083) 16083..16346 + 264 WP_049802299.1 antibiotic biosynthesis monooxygenase -
KFU79_RS23405 (16339) 16339..16725 + 387 WP_000460651.1 hypothetical protein -
KFU79_RS23410 (16733) 16733..17419 + 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
KFU79_RS23415 (17397) 17397..18020 - 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
KFU79_RS23420 (18102) 18102..19307 + 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
KFU79_RS23425 (19420) 19420..20013 - 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
KFU79_RS23430 (20101) 20101..20517 + 417 WP_000275180.1 Transposon Tn10 TetD protein VF
KFU79_RS23435 (20527) 20527..21690 - 1164 Protein_25 IS4 family transposase IS10R Transposase
KFU79_RS23440 (21705) 21705..22031 - 327 Protein_26 IS1 family transposase IS1X2 Transposase
KFU79_RS23445 (22085) 22085..22789 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
KFU79_RS23450 (22854) 22854..22991 + 138 Protein_28 tyrosine-type recombinase/integrase -
KFU79_RS23455 (23194) 23194..23544 + 351 WP_000454193.1 DUF3330 domain-containing protein -
KFU79_RS23460 (23670) 23670..23765 + 96 Protein_30 recombinase family protein -
KFU79_RS23465 (23818) 23818..24522 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
KFU79_RS23470 (24629) 24629..25489 + 861 WP_000557452.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
KFU79_RS23475 (25502) 25502..26044 + 543 WP_002063889.1 AAA family ATPase -
KFU79_RS23480 (26136) 26136..27088 + 953 Protein_34 IS3 family transposase ISKpn11 Transposase
KFU79_RS23485 (27141) 27141..27845 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
KFU79_RS23490 (27922) 27922..30363 - 2442 Protein_36 Tn3 family transposase TnpA_Tn3 Transposase
KFU79_RS23495 (30527) 30527..31084 + 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
KFU79_RS23500 (31267) 31267..32127 + 861 WP_000027057.1 Beta-lactamase TEM ARG
KFU79_RS23505 (32277) 32277..32375 - 99 Protein_39 IS1 family transposase -
KFU79_RS23510 (32404) 32404..33714 - 1311 WP_001262765.1 DUF262 domain-containing protein -
KFU79_RS23515 (33999) 33999..34400 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
KFU79_RS23520 (34333) 34333..34590 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
KFU79_RS23525 (34683) 34683..35336 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
KFU79_RS23530 (36275) 36275..37132 - 858 WP_032152935.1 incFII family plasmid replication initiator RepA -
KFU79_RS23535 (37125) 37125..37199 - 75 WP_001365705.1 RepA leader peptide Tap -
KFU79_RS23540 (37434) 37434..37691 - 258 WP_000083821.1 replication regulatory protein RepA -
KFU79_RS23545 (38096) 38096..39118 + 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
KFU79_RS23550 (39590) 39590..39943 + 354 WP_000005489.1 hypothetical protein -
KFU79_RS23555 (40356) 40356..40934 - 579 WP_032152936.1 DUF2726 domain-containing protein -
KFU79_RS23560 (40967) 40967..41664 + 698 WP_223230354.1 IS1 family transposase IS1S Transposase
KFU79_RS23565 (41779) 41779..42135 + 357 WP_000229735.1 IS66 family transposase ISEc23 Transposase
KFU79_RS23570 (42132) 42132..42482 + 351 WP_000624725.1 IS66 family transposase ISEc47 Transposase
KFU79_RS23575 (42513) 42513..42734 + 222 WP_000080227.1 IS66 family transposase ISEc43 Transposase
KFU79_RS23580 (42686) 42686..43027 + 342 Protein_54 transposase -
KFU79_RS23585 (43091) 43091..43570 - 480 WP_001496175.1 ArgR family transcriptional regulator -
KFU79_RS23590 (43651) 43651..45054 - 1404 WP_000514417.1 YfcC family protein -
KFU79_RS23595 (45102) 45102..46106 - 1005 WP_000154545.1 Ornithine carbamoyltransferase VF
KFU79_RS23600 (46191) 46191..47102 - 912 WP_000440183.1 carbamate kinase -
KFU79_RS23605 (47113) 47113..48333 - 1221 WP_000410951.1 arginine deiminase -
KFU79_RS23610 (49040) 49040..49654 + 615 Protein_60 VENN motif pre-toxin domain-containing protein -
KFU79_RS23615 (49654) 49654..50100 - 447 Protein_61 plasmid replication initiator RepA -
KFU79_RS23620 (50093) 50093..50167 - 75 WP_032336874.1 RepA leader peptide Tap -
KFU79_RS23625 (50403) 50403..50660 - 258 WP_000083833.1 replication regulatory protein RepA -
KFU79_RS23630 (50944) 50944..51093 - 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
- (51137) 51137..51198 + 62 NuclAT_2 - Antitoxin Detail
- (51137) 51137..51198 + 62 NuclAT_2 - Antitoxin Detail
- (51137) 51137..51198 + 62 NuclAT_2 - Antitoxin Detail
- (51137) 51137..51198 + 62 NuclAT_2 - Antitoxin Detail
KFU79_RS23635 (51337) 51337..51519 - 183 WP_000968309.1 hypothetical protein -
KFU79_RS23640 (51620) 51620..52236 + 617 Protein_66 IS1 family transposase IS1S Transposase
KFU79_RS23645 (52274) 52274..53845 - 1572 WP_257171241.1 IS66 family transposase ISCro1 Transposase
KFU79_RS23650 (53865) 53865..54212 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
KFU79_RS23655 (54212) 54212..54889 - 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
KFU79_RS23660 (54944) 54944..55033 + 90 Protein_70 IS1 family transposase -
KFU79_RS23665 (55334) 55334..55546 - 213 WP_005012601.1 hypothetical protein -
KFU79_RS23670 (55680) 55680..56240 - 561 WP_000139363.1 fertility inhibition protein FinO -
KFU79_RS23675 (56295) 56295..57041 - 747 WP_023149624.1 conjugal transfer pilus acetylase TraX -
KFU79_RS23680 (57061) 57061..62181 - 5121 WP_257171242.1 Multifunctional conjugation protein TraI Relaxase
KFU79_RS23685 (62181) 62181..64370 - 2190 WP_040110343.1 type IV conjugative transfer system coupling protein TraD -
KFU79_RS23690 (64622) 64622..65332 - 711 WP_045227890.1 conjugal transfer complement resistance protein TraT -
KFU79_RS23695 (65367) 65367..65876 - 510 WP_000628100.1 conjugal transfer entry exclusion protein TraS -
KFU79_RS23700 (65873) 65873..68698 - 2826 WP_001553826.1 conjugal transfer mating-pair stabilization protein TraG -
KFU79_RS23705 (68695) 68695..70068 - 1374 WP_021518370.1 conjugal transfer pilus assembly protein TraH -
KFU79_RS23710 (70055) 70055..70447 - 393 WP_000164675.1 F-type conjugal transfer protein TrbF -
KFU79_RS23715 (70401) 70401..70715 - 315 WP_023149603.1 P-type conjugative transfer protein TrbJ -
KFU79_RS23720 (70705) 70705..71259 - 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
KFU79_RS23725 (71246) 71246..71530 - 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
KFU79_RS23730 (71611) 71611..71946 + 336 WP_000415571.1 hypothetical protein -
KFU79_RS23735 (71927) 71927..72268 - 342 WP_000556794.1 conjugal transfer protein TrbA -
KFU79_RS23740 (72282) 72282..73025 - 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
KFU79_RS23745 (73018) 73018..73275 - 258 WP_000864312.1 conjugal transfer protein TrbE -
KFU79_RS23750 (73302) 73302..75110 - 1809 WP_000821840.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
KFU79_RS23755 (75107) 75107..75745 - 639 WP_021518374.1 type-F conjugative transfer system pilin assembly protein TrbC -
KFU79_RS23760 (75754) 75754..76746 - 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
KFU79_RS23765 (76743) 76743..77375 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
KFU79_RS23770 (77372) 77372..77758 - 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
KFU79_RS23775 (77755) 77755..80382 - 2628 WP_001064245.1 type IV secretion system protein TraC -
KFU79_RS23780 (80542) 80542..80763 - 222 WP_001278689.1 conjugal transfer protein TraR -
KFU79_RS23785 (80898) 80898..81413 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
KFU79_RS23790 (81410) 81410..81661 - 252 WP_001038342.1 conjugal transfer protein TrbG -
KFU79_RS23795 (81673) 81673..81870 - 198 WP_001324648.1 conjugal transfer protein TrbD -
KFU79_RS23800 (81857) 81857..82447 - 591 WP_000002787.1 conjugal transfer pilus-stabilizing protein TraP -
KFU79_RS23805 (82437) 82437..83864 - 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
KFU79_RS23810 (83864) 83864..84592 - 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
KFU79_RS23815 (84579) 84579..85145 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
KFU79_RS23820 (85167) 85167..85478 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
KFU79_RS23825 (85493) 85493..85858 - 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
KFU79_RS23830 (85891) 85891..86292 - 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
KFU79_RS23835 (86385) 86385..87074 - 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
KFU79_RS23840 (87261) 87261..87644 - 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
KFU79_RS23845 (87965) 87965..88567 + 603 WP_013362798.1 hypothetical protein VF
KFU79_RS23850 (88864) 88864..89685 - 822 WP_001234426.1 DUF932 domain-containing protein -
KFU79_RS23855 (89803) 89803..90090 - 288 WP_000107535.1 hypothetical protein -
KFU79_RS23860 (90115) 90115..90321 - 207 WP_000547968.1 hypothetical protein -
KFU79_RS23865 (90391) 90391..90563 + 173 Protein_111 hypothetical protein -
KFU79_RS23870 (90561) 90561..90791 - 231 WP_071886920.1 hypothetical protein -
KFU79_RS23875 (91011) 91011..91136 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
KFU79_RS23880 (91078) 91078..91227 - 150 Protein_114 plasmid maintenance protein Mok -
- (91213) 91213..91244 - 32 NuclAT_1 - Antitoxin Detail
- (91213) 91213..91244 - 32 NuclAT_1 - Antitoxin Detail
- (91213) 91213..91244 - 32 NuclAT_1 - Antitoxin Detail
- (91213) 91213..91244 - 32 NuclAT_1 - Antitoxin Detail
- (92686) 92686..92876 - 191 NuclAT_0 - -
- (92686) 92686..92876 - 191 NuclAT_0 - -
- (92686) 92686..92876 - 191 NuclAT_0 - -
- (92686) 92686..92876 - 191 NuclAT_0 - -
KFU79_RS23890 (92688) 92688..92876 + 189 WP_001299721.1 hypothetical protein -
KFU79_RS23895 (92845) 92845..93607 - 763 Protein_117 plasmid SOS inhibition protein A -
KFU79_RS23900 (93604) 93604..94038 - 435 WP_000845937.1 conjugation system SOS inhibitor PsiB -
KFU79_RS23905 (94093) 94093..94290 - 198 Protein_119 hypothetical protein -
KFU79_RS23910 (94318) 94318..94551 - 234 WP_000005990.1 DUF905 family protein -
KFU79_RS23915 (94619) 94619..95158 - 540 WP_000290840.1 single-stranded DNA-binding protein -
KFU79_RS23920 (95184) 95184..95390 - 207 WP_000275856.1 hypothetical protein -
KFU79_RS23925 (95630) 95630..95887 - 258 WP_023147917.1 hypothetical protein -
KFU79_RS23930 (95800) 95800..96012 - 213 WP_001348622.1 hypothetical protein -
KFU79_RS23935 (96038) 96038..96603 - 566 Protein_125 class I SAM-dependent methyltransferase -
KFU79_RS23940 (96651) 96651..98012 - 1362 WP_000199439.1 DUF3560 domain-containing protein -
KFU79_RS23945 (98064) 98064..98294 - 231 WP_000218642.1 hypothetical protein -
KFU79_RS23950 (98806) 98806..99054 + 249 WP_071781657.1 hypothetical protein -
KFU79_RS23955 (99326) 99326..99517 - 192 WP_001027495.1 hypothetical protein -
KFU79_RS23960 (99514) 99514..99936 - 423 WP_000271685.1 DUF1380 family protein -
KFU79_RS23965 (99983) 99983..100408 - 426 WP_001546490.1 antirestriction protein -
KFU79_RS23970 (100822) 100822..101592 - 771 WP_001006251.1 hypothetical protein -
KFU79_RS23975 (101637) 101637..102155 - 519 WP_223349485.1 DUF1380 family protein -
KFU79_RS23980 (102085) 102085..102306 - 222 WP_001104873.1 hypothetical protein -
KFU79_RS23985 (102307) 102307..102990 - 684 WP_040110341.1 DNA methylase -
KFU79_RS23990 (103067) 103067..103378 - 312 WP_012615291.1 hypothetical protein -
KFU79_RS23995 (103375) 103375..104277 - 903 WP_064766247.1 DUF1281 domain-containing protein -
KFU79_RS24000 (105015) 105015..105986 - 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
KFU79_RS24005 (105986) 105986..107152 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
KFU79_RS24010 (107740) 107740..108495 - 756 WP_000852146.1 replication initiation protein RepE -
KFU79_RS24015 (109217) 109217..110023 - 807 WP_000016970.1 site-specific integrase -
KFU79_RS24020 (110024) 110024..110329 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
KFU79_RS24025 (110331) 110331..110549 - 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
KFU79_RS24030 (111109) 111109..111339 + 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
KFU79_RS24035 (111336) 111336..111752 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
KFU79_RS24040 (111827) 111827..113392 + 1566 WP_001128474.1 AAA family ATPase -
KFU79_RS24045 (113377) 113377..114399 + 1023 WP_000361402.1 helicase UvrD -
KFU79_RS24050 (114653) 114653..115339 - 687 Protein_148 IS1 family transposase IS1S Transposase
KFU79_RS24055 (115865) 115865..118066 - 2202 WP_000973519.1 Ferric aerobactin receptor VF
KFU79_RS24060 (118092) 118092..119425 - 1334 Protein_150 L-lysine N6-monooxygenase VF
KFU79_RS24065 (119422) 119422..121164 - 1743 WP_001015721.1 Aerobactin synthase VF
KFU79_RS24070 (121164) 121164..122111 - 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
KFU79_RS24075 (122112) 122112..123836 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
KFU79_RS24080 (123972) 123972..125165 + 1194 WP_000095526.1 MFS transporter -
KFU79_RS24085 (125545) 125545..125925 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
KFU79_RS24090 (126266) 126266..126679 - 414 Protein_156 phosphopyruvate hydratase -
KFU79_RS24095 (126677) 126677..126934 + 258 Protein_157 transposase -
KFU79_RS24100 (127168) 127168..128025 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
KFU79_RS24105 (128022) 128022..128879 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
KFU79_RS24110 (128876) 128876..129703 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
KFU79_RS24115 (129703) 129703..130617 - 915 WP_000949005.1 Putative metal ABC transporter substrate-binding protein Hpf VF
KFU79_RS24120 (130973) 130973..131670 + 698 WP_103215986.1 IS1 family transposase IS1G Transposase
KFU79_RS24125 (131850) 131850..132363 - 514 Protein_163 DUF4113 domain-containing protein -
KFU79_RS24130 (132424) 132424..132528 - 105 Protein_164 AAA family ATPase -
KFU79_RS24135 (132530) 132530..132853 - 324 Protein_165 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance