MGE detailed information
MGE type: Genomic_island MGE length: 31879 bp
Accession: NZ_CP070962 Location: 772259..804137 Organism: Escherichia coli strain K-12 J53 Replicon: chromosome
Accession: NZ_CP070962 Location: 772259..804137 Organism: Escherichia coli strain K-12 J53 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JTR57_RS03770 (768443) | 768443..769711 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| JTR57_RS03775 (769731) | 769731..770708 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| JTR57_RS03780 (771044) | 771044..773296 | - | 2253 | Protein_738 | alpha-amylase family glycosyl hydrolase | - |
| JTR57_RS03790 (774682) | 774682..776055 | + | 1374 | Protein_739 | DUF5507 domain-containing protein | - |
| JTR57_RS23475 (776449) | 776449..776628 | + | 180 | WP_087676347.1 | DNA invertase | - |
| JTR57_RS03800 (776783) | 776783..776902 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| JTR57_RS03805 (776967) | 776967..781547 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| JTR57_RS03810 (781911) | 781911..782240 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| JTR57_RS03815 (782261) | 782261..782578 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JTR57_RS03820 (782616) | 782616..782816 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| JTR57_RS03825 (782825) | 782825..783307 | - | 483 | WP_001407480.1 | RadC family protein | - |
| JTR57_RS03830 (783316) | 783316..783774 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| JTR57_RS03835 (783877) | 783877..784100 | - | 224 | Protein_748 | DUF905 family protein | - |
| JTR57_RS03840 (784670) | 784670..786373 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| JTR57_RS03845 (786515) | 786515..787524 | + | 1010 | Protein_750 | arsenic transporter | - |
| JTR57_RS23315 (787537) | 787537..787689 | + | 153 | Protein_751 | arsenate reductase | - |
| JTR57_RS03855 (788076) | 788076..788543 | - | 468 | WP_000702495.1 | protein YfjT | - |
| JTR57_RS03860 (788567) | 788567..789010 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| JTR57_RS03865 (789010) | 789010..789246 | - | 237 | WP_001144029.1 | protein YpjK | - |
| JTR57_RS03870 (789287) | 789287..789988 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| JTR57_RS03875 (790205) | 790205..791026 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| JTR57_RS03880 (791118) | 791118..791981 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| JTR57_RS03885 (792336) | 792336..792707 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| JTR57_RS03890 (792700) | 792700..793773 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| JTR57_RS03895 (793915) | 793915..794178 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| JTR57_RS03900 (794538) | 794538..796154 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| JTR57_RS03905 (796151) | 796151..798340 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| JTR57_RS03910 (798518) | 798518..799144 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| JTR57_RS03915 (799297) | 799297..800706 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| JTR57_RS03920 (800835) | 800835..801047 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| JTR57_RS03925 (801091) | 801091..802047 | + | 957 | WP_000510827.1 | protein YfjH | - |
| JTR57_RS03930 (802291) | 802291..803532 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| JTR57_RS03940 (804313) | 804313..804795 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| JTR57_RS03945 (804966) | 804966..805403 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| JTR57_RS03950 (805393) | 805393..805683 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| JTR57_RS03955 (805745) | 805745..806086 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| JTR57_RS03960 (806235) | 806235..807896 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| JTR57_RS03965 (807982) | 807982..808860 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |