MGE detailed information
MGE type: IS/Tn MGE length: 282 bp
Accession: NZ_CP068696 Location: 4181163..4181444 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 Replicon: chromosome
Accession: NZ_CP068696 Location: 4181163..4181444 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP16345 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKV46_RS20685 () | 4176546..4179056 | - | 2511 | WP_000669634.1 | fimbrial biogenesis outer membrane usher protein | - |
| JKV46_RS20690 () | 4179080..4179817 | - | 738 | WP_001535430.1 | pili assembly chaperone SafB | - |
| JKV46_RS20695 () | 4179901..4180413 | - | 513 | WP_105907557.1 | pilus assembly protein | - |
| JKV46_RS20700 () | 4181163..4181867 | - | 705 | Protein_4036 | integrase core domain-containing protein | - |
| JKV46_RS20705 () | 4181920..4182168 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| JKV46_RS20710 () | 4182270..4182578 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| JKV46_RS20715 () | 4182661..4182777 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 4182862..4183284 | - | 423 | - | - | Antitoxin Detail |
| JKV46_RS20720 () | 4183019..4183294 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| JKV46_RS20725 () | 4183347..4183784 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| JKV46_RS20730 () | 4184347..4184793 | - | 447 | WP_000935097.1 | protein SciX | - |
| JKV46_RS20735 () | 4184787..4185656 | - | 870 | Protein_4043 | polymorphic toxin type 47 domain-containing protein | - |
| JKV46_RS20740 () | 4185720..4185983 | - | 264 | WP_000932531.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA10105 | NC_003197 | 341179..341460 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA10103 | NC_016810 | 340656..340937 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26042 | NC_016856 | 341863..342144 | 0 |