MGE detailed information
MGE type: Genomic_island MGE length: 10581 bp
Accession: NZ_CP068018 Location: 3853717..3864297 Organism: Salmonella enterica strain 1722 Replicon: chromosome
Accession: NZ_CP068018 Location: 3853717..3864297 Organism: Salmonella enterica strain 1722 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI996_RS19050 (3849639) | 3849639..3850094 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| JI996_RS19055 (3850236) | 3850236..3851465 | + | 1230 | WP_000036825.1 | amino acid permease | - |
| JI996_RS19060 (3851496) | 3851496..3851768 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| JI996_RS19065 (3851890) | 3851890..3852762 | + | 873 | WP_244757196.1 | nickel/cobalt efflux protein RcnA | - |
| JI996_RS19070 (3852972) | 3852972..3853730 | - | 759 | WP_000134791.1 | transcriptional regulator | - |
| JI996_RS19075 (3853717) | 3853717..3854229 | - | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| JI996_RS19080 (3854373) | 3854373..3855449 | - | 1077 | WP_000141329.1 | outer membrane protein | - |
| JI996_RS19085 (3855446) | 3855446..3856189 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| JI996_RS19090 (3856230) | 3856230..3858719 | - | 2490 | WP_000705483.1 | Outer membrane usher protein PapC | VF |
| JI996_RS19095 (3858839) | 3858839..3859423 | - | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| JI996_RS19100 (3860142) | 3860142..3860774 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| JI996_RS19105 (3860821) | 3860821..3861357 | - | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| JI996_RS19110 (3862163) | 3862163..3862561 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| JI996_RS19115 (3862561) | 3862561..3862788 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JI996_RS19120 (3862965) | 3862965..3863216 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| JI996_RS19125 (3863491) | 3863491..3864297 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| JI996_RS19135 (3864582) | 3864582..3865340 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| JI996_RS19140 (3865605) | 3865605..3866150 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| JI996_RS19145 (3866226) | 3866226..3867743 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.002 |