MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP067994 Location: 1101523..1133403 Organism: Escherichia coli strain CV601 Replicon: chromosome
Accession: NZ_CP067994 Location: 1101523..1133403 Organism: Escherichia coli strain CV601 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJT18_RS05260 () | 1097707..1098975 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| JJT18_RS05265 () | 1098995..1099972 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| JJT18_RS05270 () | 1100308..1102560 | - | 2253 | Protein_1028 | hypothetical protein | - |
| JJT18_RS05280 () | 1103946..1105319 | + | 1374 | Protein_1029 | DUF5507 domain-containing protein | - |
| JJT18_RS05285 () | 1105683..1105892 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| JJT18_RS05290 () | 1106047..1106166 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| JJT18_RS05295 () | 1106231..1110811 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| JJT18_RS05300 () | 1111175..1111504 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| JJT18_RS05305 () | 1111525..1111842 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JJT18_RS05310 () | 1111880..1112080 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| JJT18_RS05315 () | 1112089..1112571 | - | 483 | WP_001407480.1 | RadC family protein | - |
| JJT18_RS05320 () | 1112580..1113038 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| JJT18_RS05325 () | 1113141..1113364 | - | 224 | Protein_1038 | DUF905 family protein | - |
| JJT18_RS05330 () | 1113936..1115639 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| JJT18_RS05335 () | 1115781..1116790 | + | 1010 | Protein_1040 | arsenic transporter | - |
| JJT18_RS05340 () | 1116803..1117117 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| JJT18_RS05345 () | 1117342..1117809 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| JJT18_RS05350 () | 1117833..1118276 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| JJT18_RS05355 () | 1118276..1118512 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| JJT18_RS05360 () | 1118553..1119254 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| JJT18_RS05365 () | 1119471..1120292 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| JJT18_RS05370 () | 1120384..1121247 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| JJT18_RS05375 () | 1121602..1121973 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| JJT18_RS05380 () | 1121966..1123039 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| JJT18_RS05385 () | 1123181..1123444 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| JJT18_RS05390 () | 1123804..1125420 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| JJT18_RS05395 () | 1125417..1127606 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| JJT18_RS05400 () | 1127784..1128410 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| JJT18_RS05405 () | 1128563..1129972 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| JJT18_RS05410 () | 1130101..1130313 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| JJT18_RS05415 () | 1130357..1131313 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| JJT18_RS05420 () | 1131557..1132798 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| JJT18_RS05430 () | 1133579..1134061 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| JJT18_RS05435 () | 1134232..1134669 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| JJT18_RS05440 () | 1134659..1134949 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| JJT18_RS05445 () | 1135011..1135352 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| JJT18_RS05450 () | 1135501..1137162 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| JJT18_RS05455 () | 1137248..1138126 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |