NZ_CP0673973124780..3136072

MGE detailed information

MGE type: Genomic_island        MGE length: 11293 bp
Accession: NZ_CP067397        Location: 3124780..3136072         Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JJB81_RS15155 (3120708) 3120708..3121163 + 456 WP_001519547.1 multidrug/biocide efflux PACE transporter -
JJB81_RS15160 (3121305) 3121305..3122534 + 1230 WP_210138826.1 amino acid permease -
JJB81_RS15165 (3122565) 3122565..3122837 - 273 WP_000019953.1 Ni(II)/Co(II)-binding transcriptional repressor RcnR -
JJB81_RS15170 (3122959) 3122959..3123825 + 867 WP_000503682.1 nickel/cobalt efflux protein RcnA -
JJB81_RS15175 (3124035) 3124035..3124793 - 759 WP_000134792.1 transcriptional regulator -
JJB81_RS15180 (3124780) 3124780..3125292 - 513 WP_000336259.1 CaiF/GrlA family transcriptional regulator -
JJB81_RS15185 (3125436) 3125436..3126512 - 1077 WP_000141329.1 outer membrane protein -
JJB81_RS15190 (3126509) 3126509..3127252 - 744 WP_000798504.1 Chaperone protein PapD VF
JJB81_RS15195 (3127293) 3127293..3129782 - 2490 WP_000705484.1 Outer membrane usher protein PapC VF
JJB81_RS15200 (3129902) 3129902..3130486 - 585 WP_001244638.1 putative fimbrial-like protein YbgD VF
JJB81_RS15205 (3131205) 3131205..3131837 - 633 WP_000835265.1 YfdX family protein -
JJB81_RS15210 (3131884) 3131884..3132420 - 537 WP_001038506.1 Attachment invasion locus protein VF
JJB81_RS15215 (3133100) 3133100..3133558 - 459 WP_000502119.1 IS200-IS605 family transposase IS200F Transposase
JJB81_RS15220 (3133938) 3133938..3134336 - 399 WP_000911336.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
JJB81_RS15225 (3134336) 3134336..3134563 - 228 WP_000557549.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
JJB81_RS15230 (3134740) 3134740..3134991 + 252 WP_001540858.1 hypothetical protein -
JJB81_RS15235 (3135266) 3135266..3136072 + 807 WP_010989071.1 DUF1460 domain-containing protein -
JJB81_RS15245 (3136357) 3136357..3137115 - 759 WP_000244329.1 amidase activator ActS -
JJB81_RS15250 (3137380) 3137380..3137925 + 546 WP_000133994.1 isopentenyl-diphosphate Delta-isomerase -
JJB81_RS15255 (3138001) 3138001..3139518 - 1518 WP_000003339.1 lysine--tRNA ligase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Genomic island TA439 NC_003197 3186004..3197296 0
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 Genomic island TA25956 NC_016810 3207430..3218010 0.002
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Genomic island TA26056 NC_016856 3205849..3216429 0.002
Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Genomic island TA297244 UFRD01000002 4451871..4463194 0.004