MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP067397 Location: 2986291..2986467 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: chromosome
Accession: NZ_CP067397 Location: 2986291..2986467 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB81_RS14530 (2981354) | 2981354..2982004 | - | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| JJB81_RS14535 (2982461) | 2982461..2982904 | + | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| JJB81_RS14540 (2983335) | 2983335..2983784 | + | 450 | WP_000381610.1 | membrane protein | - |
| JJB81_RS14545 (2983769) | 2983769..2984116 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| JJB81_RS14550 (2984389) | 2984389..2984715 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| JJB81_RS14555 (2984956) | 2984956..2985134 | + | 179 | Protein_2855 | IS3 family transposase | - |
| JJB81_RS14560 (2985404) | 2985404..2985694 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JJB81_RS14565 (2985691) | 2985691..2986218 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JJB81_RS14570 (2986291) | 2986291..2986496 | - | 206 | Protein_2858 | IS5 family transposase ISEcl3 | Transposase |
| JJB81_RS14575 (2986843) | 2986843..2987499 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| JJB81_RS14580 (2987671) | 2987671..2988192 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| JJB81_RS14585 (2988351) | 2988351..2990918 | + | 2568 | WP_210138824.1 | DNA mismatch repair protein MutS | - |
| JJB81_RS14590 (2990974) | 2990974..2991354 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |