MGE detailed information
MGE type: Genomic_island MGE length: 11293 bp
Accession: NZ_CP067091 Location: 3124048..3135340 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Replicon: chromosome
Accession: NZ_CP067091 Location: 3124048..3135340 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB80_RS15160 (3119976) | 3119976..3120431 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| JJB80_RS15165 (3120573) | 3120573..3121802 | + | 1230 | WP_210138826.1 | amino acid permease | - |
| JJB80_RS15170 (3121833) | 3121833..3122105 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| JJB80_RS15175 (3122227) | 3122227..3123093 | + | 867 | WP_000503682.1 | nickel/cobalt efflux protein RcnA | - |
| JJB80_RS15180 (3123303) | 3123303..3124061 | - | 759 | WP_000134792.1 | transcriptional regulator | - |
| JJB80_RS15185 (3124048) | 3124048..3124560 | - | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| JJB80_RS15190 (3124704) | 3124704..3125780 | - | 1077 | WP_000141329.1 | outer membrane protein | - |
| JJB80_RS15195 (3125777) | 3125777..3126520 | - | 744 | WP_000798504.1 | hypothetical protein | VF |
| JJB80_RS15200 (3126561) | 3126561..3129050 | - | 2490 | WP_000705484.1 | hypothetical protein | VF |
| JJB80_RS15205 (3129170) | 3129170..3129754 | - | 585 | WP_001244638.1 | hypothetical protein | VF |
| JJB80_RS15210 (3130473) | 3130473..3131105 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| JJB80_RS15215 (3131152) | 3131152..3131688 | - | 537 | WP_001038506.1 | hypothetical protein | VF |
| JJB80_RS15220 (3132368) | 3132368..3132826 | - | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| JJB80_RS15225 (3133206) | 3133206..3133604 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| JJB80_RS15230 (3133604) | 3133604..3133831 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JJB80_RS15235 (3134008) | 3134008..3134259 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| JJB80_RS15240 (3134534) | 3134534..3135340 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| JJB80_RS15250 (3135625) | 3135625..3136383 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| JJB80_RS15255 (3136648) | 3136648..3137193 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| JJB80_RS15260 (3137269) | 3137269..3138786 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.004 |