MGE detailed information
MGE type: Prophage MGE length: 36224 bp
Accession: NZ_CP067091 Location: 1935468..1971691 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Replicon: chromosome
Accession: NZ_CP067091 Location: 1935468..1971691 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ER3625 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJB80_RS09430 () | 1931197..1931667 | + | 471 | WP_000156281.1 | DUF986 family protein | - |
| JJB80_RS09435 () | 1932065..1932631 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| JJB80_RS09440 () | 1932628..1933437 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JJB80_RS09445 () | 1933503..1935248 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| JJB80_RS09450 () | 1935468..1935677 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JJB80_RS09455 () | 1935690..1935833 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| JJB80_RS09460 () | 1936482..1936769 | - | 288 | WP_001000660.1 | YebO family protein | - |
| JJB80_RS09465 () | 1936840..1936983 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| JJB80_RS09470 () | 1937141..1937380 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| JJB80_RS09475 () | 1937592..1938383 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| JJB80_RS09480 () | 1938559..1939932 | + | 1374 | WP_000416127.1 | MFS transporter | - |
| JJB80_RS09485 () | 1939980..1940861 | - | 882 | WP_000984498.1 | protease HtpX | - |
| JJB80_RS09490 () | 1941055..1943103 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| JJB80_RS09495 () | 1943123..1943809 | - | 687 | WP_210138948.1 | RNA chaperone ProQ | - |
| JJB80_RS09500 () | 1943907..1944404 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| JJB80_RS09505 () | 1944533..1945816 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| JJB80_RS09510 () | 1945785..1948418 | + | 2634 | WP_001535256.1 | hypothetical protein | VF |
| JJB80_RS09515 () | 1948496..1949935 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JJB80_RS09520 () | 1950053..1950289 | + | 237 | WP_024131108.1 | YebV family protein | - |
| JJB80_RS09525 () | 1950400..1950591 | + | 192 | WP_000457836.1 | YebW family protein | - |
| JJB80_RS09530 () | 1950610..1951260 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| JJB80_RS09535 () | 1951484..1951648 | - | 165 | WP_001134856.1 | membrane protein | - |
| JJB80_RS09540 () | 1951933..1952655 | - | 723 | WP_000182072.1 | hypothetical protein | VF |
| JJB80_RS09545 () | 1953339..1953734 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| JJB80_RS09550 () | 1954064..1954540 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| JJB80_RS09555 () | 1954928..1955347 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| JJB80_RS09560 () | 1955717..1955986 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| JJB80_RS09565 () | 1956152..1956292 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| JJB80_RS09570 () | 1956438..1957632 | - | 1195 | Protein_1876 | IS256 family transposase IS285 | Transposase |
| JJB80_RS09575 () | 1957702..1958124 | + | 423 | Protein_1877 | hypothetical protein ; Integrase | Integrase |
| JJB80_RS09580 () | 1959428..1960342 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| JJB80_RS09585 () | 1960475..1960633 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| JJB80_RS09590 () | 1960643..1961257 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| JJB80_RS23790 () | 1961584..1961751 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| JJB80_RS23940 () | 1961745..1961891 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| JJB80_RS09605 () | 1962405..1962530 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| JJB80_RS23795 () | 1962530..1962710 | + | 181 | Protein_1884 | IS3 family transposase | - |
| JJB80_RS09610 () | 1963100..1963300 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| JJB80_RS23800 () | 1963397..1963867 | - | 471 | Protein_1886 | tail fiber assembly protein | - |
| JJB80_RS23805 () | 1963877..1964221 | - | 345 | Protein_1887 | macro domain-containing protein | - |
| JJB80_RS09620 () | 1964436..1964696 | - | 261 | Protein_1888 | DUF1441 family protein | - |
| JJB80_RS09625 () | 1964751..1964939 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| JJB80_RS09630 () | 1965004..1965171 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| JJB80_RS09635 () | 1965428..1965961 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| JJB80_RS09640 () | 1966015..1966206 | - | 192 | Protein_1892 | glycoside hydrolase family 19 protein | - |
| JJB80_RS23810 () | 1966195..1966656 | + | 462 | Protein_1893 | DNA breaking-rejoining protein | - |
| JJB80_RS09650 () | 1966920..1967843 | + | 924 | Protein_1894 | hypothetical protein ; Integrase | Integrase |
| - | 1967972..1968117 | + | 146 | - | - | Antitoxin Detail |
| - | 1967974..1968077 | - | 104 | - | - | Toxin Detail |
| JJB80_RS09655 () | 1968217..1968570 | - | 354 | WP_000722368.1 | YebY family protein | - |
| JJB80_RS09660 () | 1968587..1969462 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| JJB80_RS09665 () | 1969463..1969837 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| JJB80_RS09670 () | 1969975..1970205 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| JJB80_RS09675 () | 1970313..1970969 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| JJB80_RS09680 () | 1970993..1971691 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| JJB80_RS09685 () | 1971726..1973777 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| JJB80_RS09690 () | 1973990..1974649 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| JJB80_RS09695 () | 1974743..1975096 | - | 354 | WP_001042119.1 | protein YebF | - |
| JJB80_RS09700 () | 1975164..1975454 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.002 |