MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP064385 Location: 1793847..1794023 Organism: Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376 Replicon: chromosome
Accession: NZ_CP064385 Location: 1793847..1794023 Organism: Salmonella enterica subsp. enterica strain PartC-Senterica-RM8376 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ38_RS08890 (1788910) | 1788910..1789560 | - | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| IUJ38_RS08895 (1790017) | 1790017..1790460 | + | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| IUJ38_RS08900 (1790891) | 1790891..1791340 | + | 450 | WP_000381610.1 | membrane protein | - |
| IUJ38_RS08905 (1791325) | 1791325..1791672 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| IUJ38_RS08910 (1791945) | 1791945..1792271 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| IUJ38_RS08915 (1792512) | 1792512..1792690 | + | 179 | Protein_1747 | IS3 family transposase | - |
| IUJ38_RS08920 (1792960) | 1792960..1793250 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| IUJ38_RS08925 (1793247) | 1793247..1793774 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| IUJ38_RS08930 (1793847) | 1793847..1794052 | - | 206 | Protein_1750 | IS5 family transposase ISEcl3 | Transposase |
| IUJ38_RS08935 (1794399) | 1794399..1795055 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| IUJ38_RS08940 (1795227) | 1795227..1795748 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| IUJ38_RS08945 (1795907) | 1795907..1798474 | + | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| IUJ38_RS08950 (1798530) | 1798530..1798910 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |