MGE detailed information
MGE type: Conjugative plasmid MGE length: 145347 bp
Accession: NZ_CP064104 Location: 1..145347 Organism: Escherichia coli strain IR53017 Replicon: plasmid unnamed1
Accession: NZ_CP064104 Location: 1..145347 Organism: Escherichia coli strain IR53017 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ISU84_RS25550 () | 529..891 | - | 363 | WP_207106386.1 | DUF2726 domain-containing protein | - |
| ISU84_RS25555 () | 1120..1817 | + | 698 | Protein_2 | IS1 family transposase | - |
| ISU84_RS25560 () | 1872..2374 | + | 503 | Protein_3 | transposase | - |
| ISU84_RS25565 () | 2313..2665 | + | 353 | Protein_4 | IS66 family insertion sequence element accessory protein TnpB | - |
| ISU84_RS25570 () | 2697..2918 | + | 222 | WP_000080227.1 | IS66 family transposase ISEc43 | Transposase |
| ISU84_RS25575 () | 2870..3212 | + | 343 | Protein_6 | IS66 family transposase ISEc43 | Transposase |
| ISU84_RS25580 () | 3276..3755 | - | 480 | Protein_7 | ArgR family transcriptional regulator | - |
| ISU84_RS25585 () | 3837..5240 | - | 1404 | WP_207106387.1 | YfcC family protein | - |
| ISU84_RS25590 () | 5288..6292 | - | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| ISU84_RS25595 () | 6377..7288 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| ISU84_RS25600 () | 7299..8519 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| ISU84_RS25605 () | 9412..9894 | + | 483 | Protein_12 | VENN motif pre-toxin domain-containing protein | - |
| ISU84_RS25610 () | 9840..10286 | - | 447 | Protein_13 | incFII family plasmid replication initiator RepA | - |
| ISU84_RS25615 () | 10279..10353 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| ISU84_RS25620 () | 10589..10846 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| ISU84_RS25625 () | 11130..11336 | - | 207 | WP_015387399.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 11323..11384 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 11323..11384 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 11323..11384 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 11323..11384 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| ISU84_RS25630 () | 11523..11705 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| ISU84_RS25635 () | 11806..12422 | + | 617 | Protein_18 | IS1 family transposase IS1S | Transposase |
| ISU84_RS25640 () | 12460..14031 | - | 1572 | WP_113305802.1 | IS66 family transposase ISCro1 | Transposase |
| ISU84_RS25645 () | 14051..14398 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| ISU84_RS25650 () | 14398..15075 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| ISU84_RS25655 () | 15130..15219 | + | 90 | Protein_22 | IS1 family transposase | - |
| ISU84_RS25660 () | 15520..15732 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| ISU84_RS25665 () | 15866..16426 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| ISU84_RS25670 () | 16481..17227 | - | 747 | WP_023149624.1 | conjugal transfer pilus acetylase TraX | - |
| ISU84_RS25675 () | 17247..22367 | - | 5121 | WP_013362805.1 | Multifunctional conjugation protein TraI | Relaxase |
| ISU84_RS25680 () | 22367..24556 | - | 2190 | WP_040110343.1 | type IV conjugative transfer system coupling protein TraD | - |
| ISU84_RS25685 () | 24808..25539 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| ISU84_RS25690 () | 25553..26062 | - | 510 | WP_000628100.1 | conjugal transfer entry exclusion protein TraS | - |
| ISU84_RS25695 () | 26059..28884 | - | 2826 | WP_001553826.1 | conjugal transfer mating pair stabilization protein TraG | - |
| ISU84_RS25700 () | 28881..30254 | - | 1374 | WP_021518370.1 | conjugal transfer protein TraH | - |
| ISU84_RS25705 () | 30241..30633 | - | 393 | WP_000164675.1 | F-type conjugal transfer protein TrbF | - |
| ISU84_RS25710 () | 30587..30961 | - | 375 | WP_071788165.1 | P-type conjugative transfer protein TrbJ | - |
| ISU84_RS25715 () | 30891..31445 | - | 555 | WP_001553830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| ISU84_RS25720 () | 31432..31716 | - | 285 | WP_000624105.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ISU84_RS25725 () | 31797..32132 | + | 336 | WP_000415571.1 | hypothetical protein | - |
| ISU84_RS25730 () | 32113..32454 | - | 342 | WP_000556794.1 | conjugal transfer protein TrbA | - |
| ISU84_RS25735 () | 32468..33211 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| ISU84_RS25740 () | 33204..33461 | - | 258 | WP_000864312.1 | conjugal transfer protein TrbE | - |
| ISU84_RS25745 () | 33488..35296 | - | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| ISU84_RS25750 () | 35293..35931 | - | 639 | WP_021518374.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| ISU84_RS25755 () | 35940..36932 | - | 993 | WP_000830180.1 | conjugal transfer pilus assembly protein TraU | - |
| ISU84_RS25760 () | 36929..37561 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| ISU84_RS25765 () | 37558..37944 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| ISU84_RS25770 () | 37941..40568 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| ISU84_RS25775 () | 40728..40949 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| ISU84_RS25780 () | 41084..41599 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ISU84_RS25785 () | 41596..41847 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| ISU84_RS25790 () | 41859..42089 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| ISU84_RS25795 () | 42043..42633 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| ISU84_RS25800 () | 42623..44050 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| ISU84_RS25805 () | 44050..44754 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| ISU84_RS25810 () | 44765..45331 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| ISU84_RS25815 () | 45353..45664 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| ISU84_RS25820 () | 45679..46044 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| ISU84_RS25825 () | 46077..46472 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| ISU84_RS25830 () | 46571..47260 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| ISU84_RS25835 () | 47447..47830 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| ISU84_RS25840 () | 48151..48753 | + | 603 | WP_013362798.1 | hypothetical protein | VF |
| ISU84_RS25845 () | 49050..49871 | - | 822 | WP_001234426.1 | DUF945 domain-containing protein | - |
| ISU84_RS25850 () | 49989..50276 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| ISU84_RS25855 () | 51197..51355 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 51399..51623 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51399..51623 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51399..51623 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51399..51623 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| ISU84_RS25860 () | 51435..51623 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| ISU84_RS25865 () | 51635..52354 | - | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| ISU84_RS25870 () | 52351..52785 | - | 435 | WP_000845937.1 | conjugation system SOS inhibitor PsiB | - |
| ISU84_RS25875 () | 52840..53037 | - | 198 | Protein_66 | hypothetical protein | - |
| ISU84_RS25880 () | 53065..53298 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| ISU84_RS25885 () | 53366..53905 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| ISU84_RS25890 () | 53931..54137 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| ISU84_RS25895 () | 54547..54759 | - | 213 | WP_001348622.1 | hypothetical protein | - |
| ISU84_RS25900 () | 54785..55350 | - | 566 | Protein_71 | class I SAM-dependent methyltransferase | - |
| ISU84_RS25905 () | 55398..56759 | - | 1362 | WP_000199439.1 | DUF3560 domain-containing protein | - |
| ISU84_RS25910 () | 56811..57041 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| ISU84_RS25915 () | 57553..57801 | + | 249 | WP_071781657.1 | hypothetical protein | - |
| ISU84_RS25920 () | 58073..58264 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| ISU84_RS25925 () | 58261..58683 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| ISU84_RS25930 () | 58730..59032 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| ISU84_RS25935 () | 59569..60339 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| ISU84_RS25940 () | 60384..60818 | - | 435 | WP_001546462.1 | DUF1380 family protein | - |
| ISU84_RS25945 () | 60832..61053 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| ISU84_RS25950 () | 61054..61737 | - | 684 | WP_040110341.1 | DNA methylase | - |
| ISU84_RS25955 () | 61814..62118 | - | 305 | Protein_82 | hypothetical protein | - |
| ISU84_RS25960 () | 62122..63024 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| ISU84_RS25965 () | 63762..64733 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| ISU84_RS25970 () | 64733..65899 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| ISU84_RS25975 () | 66487..67242 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| ISU84_RS25980 () | 67964..68770 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| ISU84_RS25985 () | 68771..69076 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| ISU84_RS25990 () | 69078..69296 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| ISU84_RS25995 () | 69856..70086 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ISU84_RS26000 () | 70083..70499 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ISU84_RS26005 () | 70574..72139 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| ISU84_RS26010 () | 72124..73146 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| ISU84_RS26015 () | 73400..74086 | - | 687 | Protein_94 | IS1 family transposase IS1S | Transposase |
| ISU84_RS26020 () | 74612..76813 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| ISU84_RS26025 () | 76895..78172 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| ISU84_RS26030 () | 78169..79911 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| ISU84_RS26035 () | 79911..80858 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| ISU84_RS26040 () | 80859..82583 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| ISU84_RS26045 () | 82719..83912 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| ISU84_RS26050 () | 84292..84672 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| ISU84_RS26055 () | 85013..85426 | - | 414 | Protein_102 | phosphopyruvate hydratase | - |
| ISU84_RS26060 () | 85424..85681 | + | 258 | Protein_103 | Tn3 family transposase | - |
| ISU84_RS26065 () | 85915..86772 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| ISU84_RS26070 () | 86769..87626 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| ISU84_RS26075 () | 87623..88450 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| ISU84_RS26080 () | 88450..89364 | - | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| ISU84_RS26085 () | 89720..90406 | + | 687 | Protein_108 | IS1 family transposase IS1S | Transposase |
| ISU84_RS26090 () | 90586..91099 | - | 514 | Protein_109 | DUF4113 domain-containing protein | - |
| ISU84_RS26095 () | 91160..91264 | - | 105 | Protein_110 | AAA family ATPase | - |
| ISU84_RS26100 () | 91266..91589 | - | 324 | Protein_111 | IS21 family transposase IS21 | Transposase |
| ISU84_RS26105 () | 92335..93312 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| ISU84_RS26110 () | 93597..94337 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| ISU84_RS26115 () | 94458..94646 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| ISU84_RS26120 () | 95013..96182 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| ISU84_RS26125 () | 96408..96583 | - | 176 | Protein_116 | IS3 family transposase | - |
| ISU84_RS26130 () | 97029..97301 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| ISU84_RS26135 () | 97826..98262 | - | 437 | Protein_118 | IS3 family transposase IS2 | Transposase |
| ISU84_RS26140 () | 98544..100514 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| ISU84_RS26145 () | 100521..101312 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| ISU84_RS26150 () | 101375..101983 | - | 609 | Protein_121 | IS66 family transposase ISEc22 | Transposase |
| ISU84_RS26155 () | 102051..102833 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| ISU84_RS26160 () | 102830..103852 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| ISU84_RS26165 () | 103938..104883 | - | 946 | Protein_124 | IS66 family transposase ISEc8 | Transposase |
| ISU84_RS26170 () | 104932..105306 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| ISU84_RS26175 () | 105331..106035 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ISU84_RS26180 () | 106088..106885 | - | 798 | Protein_127 | IS91 family transposase ISAzo26 | Transposase |
| ISU84_RS26185 () | 107043..107516 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| ISU84_RS26190 () | 107647..108435 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| ISU84_RS26195 () | 108641..108988 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| ISU84_RS26200 () | 108982..109821 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| ISU84_RS26205 () | 109949..110152 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| ISU84_RS26210 () | 110308..111513 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| ISU84_RS26215 () | 111524..111829 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| ISU84_RS26220 () | 111873..111938 | + | 66 | Protein_135 | EAL domain-containing protein | - |
| ISU84_RS26225 () | 112056..112820 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| ISU84_RS26230 () | 113313..113897 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| ISU84_RS26235 () | 113897..115135 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| ISU84_RS26240 () | 115132..116037 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| ISU84_RS26245 () | 116159..116863 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ISU84_RS26250 () | 116921..119335 | + | 2415 | Protein_141 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| ISU84_RS26255 () | 119369..119473 | + | 105 | Protein_142 | IS5/IS1182 family transposase | - |
| ISU84_RS26260 () | 119623..120255 | - | 633 | Protein_143 | histidine-type phosphatase | - |
| ISU84_RS26265 () | 120377..120862 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| ISU84_RS26270 () | 120887..121372 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| ISU84_RS26275 () | 121359..122054 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| ISU84_RS26280 () | 122059..123189 | - | 1131 | WP_000729219.1 | ABC transporter permease | - |
| ISU84_RS26285 () | 123179..124462 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| ISU84_RS26290 () | 124465..125844 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| ISU84_RS26295 () | 125948..126475 | - | 528 | WP_000178050.1 | iron transporter | - |
| ISU84_RS26300 () | 126516..128402 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| ISU84_RS26305 () | 128749..129564 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| ISU84_RS26310 () | 129747..130253 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| ISU84_RS26315 () | 130243..130401 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| ISU84_RS26320 () | 130551..130664 | - | 114 | Protein_155 | IS6 family transposase | - |
| ISU84_RS26325 () | 130864..131561 | + | 698 | Protein_156 | IS1 family transposase IS1R | Transposase |
| ISU84_RS26330 () | 131576..132739 | + | 1164 | Protein_157 | IS4 family transposase IS10R | Transposase |
| ISU84_RS26335 () | 132749..133120 | - | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| ISU84_RS26340 () | 133253..133846 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| ISU84_RS26345 () | 133959..135164 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| ISU84_RS26350 () | 135246..135869 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| ISU84_RS26355 () | 135847..136533 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| ISU84_RS26360 () | 136541..136927 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| ISU84_RS26365 () | 136920..137183 | - | 264 | WP_049802299.1 | antibiotic biosynthesis monooxygenase | - |
| ISU84_RS26370 () | 137180..137877 | - | 698 | Protein_165 | IS1 family transposase IS1R | Transposase |
| ISU84_RS26375 () | 137906..139216 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| ISU84_RS26380 () | 139501..139902 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| ISU84_RS26385 () | 139835..140092 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| ISU84_RS26390 () | 140185..140838 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| ISU84_RS26395 () | 140936..141076 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| ISU84_RS26400 () | 141777..142634 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| ISU84_RS26405 () | 142627..142701 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| ISU84_RS26410 () | 142936..143193 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| ISU84_RS26415 () | 143598..144620 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|