MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 137420 bp
Accession: NZ_CP060000 Location: 1..137420 Organism: Xanthomonas citri pv. citri strain B2 Replicon: plasmid pB2_V1
Accession: NZ_CP060000 Location: 1..137420 Organism: Xanthomonas citri pv. citri strain B2 Replicon: plasmid pB2_V1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZS92_RS21900 (HZS92_06001) | 3..359 | + | 357 | Protein_0 | replication protein A | - |
| HZS92_RS21905 (HZS92_06003) | 725..4003 | - | 3279 | WP_219865225.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS92_RS21910 | 4249..4470 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| HZS92_RS21915 (HZS92_06007) | 4760..5296 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| HZS92_RS21920 (HZS92_06008) | 5286..5498 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| HZS92_RS21925 (HZS92_06009) | 5495..5746 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| HZS92_RS21930 (HZS92_06010) | 5769..6101 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HZS92_RS21935 (HZS92_06011) | 6101..6358 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| HZS92_RS21940 (HZS92_06012) | 6564..7166 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| HZS92_RS21945 (HZS92_06013) | 7150..7454 | + | 305 | Protein_9 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| HZS92_RS21950 (HZS92_06014) | 7621..7851 | - | 231 | WP_268811174.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| HZS92_RS21955 (HZS92_06015) | 7872..8441 | - | 570 | Protein_11 | UPF0149 family protein | - |
| HZS92_RS21960 (HZS92_06016) | 8460..9674 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| HZS92_RS21965 | 9748..9930 | - | 183 | Protein_13 | UPF0149 family protein | - |
| HZS92_RS21970 (HZS92_06018) | 9949..12924 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| HZS92_RS21975 (HZS92_06019) | 12929..13348 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HZS92_RS21980 (HZS92_06020) | 13348..13587 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| HZS92_RS21985 (HZS92_06021) | 13801..14724 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| HZS92_RS21990 (HZS92_06022) | 14843..17923 | - | 3081 | WP_219865226.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS92_RS21995 (HZS92_06024) | 19177..19413 | - | 237 | WP_015463816.1 | plasmid partition protein ParG | - |
| HZS92_RS22000 (HZS92_06025) | 19410..20039 | - | 630 | WP_015463817.1 | ParA family partition ATPase | - |
| HZS92_RS22005 (HZS92_06026) | 20122..20859 | - | 738 | WP_011052960.1 | DNA-binding protein | - |
| HZS92_RS22010 (HZS92_06027) | 21494..22315 | - | 822 | WP_011052929.1 | hypothetical protein | - |
| HZS92_RS22015 (HZS92_06028) | 22955..23119 | + | 165 | WP_155400514.1 | hypothetical protein | - |
| HZS92_RS22020 (HZS92_06030) | 23168..24255 | + | 1088 | WP_087943923.1 | IS3 family transposase ISXac2 | Transposase |
| HZS92_RS22025 (HZS92_06031) | 24221..24850 | - | 630 | WP_011052932.1 | Tn3 family transposase ISPsy42 | Transposase |
| HZS92_RS22030 (HZS92_06032) | 25030..25281 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| HZS92_RS22035 (HZS92_06033) | 25278..25673 | + | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| HZS92_RS23525 | 25685..25801 | + | 117 | Protein_28 | transposase | - |
| HZS92_RS22040 (HZS92_06035) | 25834..26211 | - | 378 | WP_040260048.1 | hypothetical protein | - |
| HZS92_RS22045 | 26270..26515 | - | 246 | Protein_30 | IS3 family transposase ISStma14 | Transposase |
| HZS92_RS22050 (HZS92_06037) | 26655..26950 | + | 296 | Protein_31 | transposase | - |
| HZS92_RS22055 | 27042..27215 | - | 174 | Protein_32 | hypothetical protein | - |
| HZS92_RS22060 (HZS92_06038) | 27215..27610 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| HZS92_RS22065 (HZS92_06039) | 27958..28404 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| HZS92_RS22070 (HZS92_06040) | 28401..29110 | + | 710 | Protein_35 | StbB family protein | - |
| HZS92_RS22075 (HZS92_06041) | 29159..29512 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| HZS92_RS22080 (HZS92_06042) | 29907..30116 | - | 210 | WP_015462608.1 | helix-turn-helix transcriptional regulator | - |
| HZS92_RS22085 (HZS92_06043) | 30113..30421 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| HZS92_RS22090 (HZS92_06044) | 30877..31503 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| HZS92_RS22095 (HZS92_06045) | 31500..31823 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| HZS92_RS22100 (HZS92_06046) | 31968..32282 | + | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
| HZS92_RS22105 (HZS92_06047) | 32530..33750 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| HZS92_RS22110 (HZS92_06049) | 34116..37406 | - | 3291 | WP_219865227.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS92_RS22115 (HZS92_06053) | 38765..39841 | - | 1077 | WP_040107542.1 | XopE/AvrPphe family type III secretion system effector | - |
| HZS92_RS22120 (HZS92_06055) | 39974..41029 | - | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| HZS92_RS22125 (HZS92_06056) | 41221..42495 | + | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| HZS92_RS22130 (HZS92_06057) | 42503..45493 | + | 2991 | WP_011052967.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| HZS92_RS22135 (HZS92_06058) | 45626..46903 | + | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| HZS92_RS22140 (HZS92_06059) | 46946..47290 | + | 345 | WP_075150220.1 | hypothetical protein | - |
| HZS92_RS22145 (HZS92_06060) | 47415..47912 | - | 498 | Protein_50 | hypothetical protein | - |
| HZS92_RS22150 (HZS92_06061) | 47909..48514 | - | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| HZS92_RS22155 (HZS92_06062) | 48511..48960 | - | 450 | WP_015462602.1 | hypothetical protein | - |
| HZS92_RS22160 (HZS92_06063) | 49287..49886 | - | 600 | WP_015462601.1 | hypothetical protein | - |
| HZS92_RS22165 (HZS92_06064) | 50033..50362 | + | 330 | WP_005918642.1 | hypothetical protein | - |
| HZS92_RS22170 (HZS92_06065) | 50412..50618 | + | 207 | WP_011052961.1 | hypothetical protein | - |
| HZS92_RS22175 (HZS92_06066) | 50672..51088 | + | 417 | WP_087962480.1 | transposase | - |
| HZS92_RS22180 | 51219..51401 | - | 183 | Protein_57 | helix-turn-helix domain-containing protein | - |
| HZS92_RS22185 (HZS92_06068) | 51445..52368 | - | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| HZS92_RS22190 (HZS92_06069) | 52582..52821 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| HZS92_RS22195 (HZS92_06070) | 52821..53240 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HZS92_RS22200 (HZS92_06071) | 53245..56220 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| HZS92_RS22205 | 56239..56421 | + | 183 | Protein_62 | UPF0149 family protein | - |
| HZS92_RS22210 (HZS92_06073) | 56495..57709 | + | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| HZS92_RS22215 (HZS92_06074) | 57728..58297 | + | 570 | Protein_64 | UPF0149 family protein | - |
| HZS92_RS22220 (HZS92_06075) | 58318..58548 | + | 231 | WP_268811174.1 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| HZS92_RS22225 (HZS92_06076) | 58715..59019 | - | 305 | Protein_66 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| HZS92_RS22230 (HZS92_06077) | 59003..59605 | - | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| HZS92_RS22235 (HZS92_06078) | 59811..60068 | + | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| HZS92_RS22240 (HZS92_06079) | 60068..60400 | + | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HZS92_RS22245 (HZS92_06080) | 60423..60674 | + | 252 | WP_125459571.1 | hypothetical protein | - |
| HZS92_RS22250 (HZS92_06081) | 60671..60883 | + | 213 | WP_011052947.1 | hypothetical protein | - |
| HZS92_RS22255 (HZS92_06082) | 60873..61409 | + | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| HZS92_RS22260 | 61699..61920 | + | 222 | WP_011052944.1 | hypothetical protein | - |
| HZS92_RS22265 (HZS92_06086) | 62166..65444 | + | 3279 | WP_219865225.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS92_RS22270 (HZS92_06088) | 65810..67030 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| HZS92_RS22275 (HZS92_06089) | 67278..67592 | - | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
| HZS92_RS22280 (HZS92_06090) | 67737..68060 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| HZS92_RS22285 (HZS92_06091) | 68057..68683 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| HZS92_RS22290 (HZS92_06092) | 69139..69447 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| HZS92_RS22295 (HZS92_06093) | 69444..69653 | + | 210 | WP_015462608.1 | helix-turn-helix transcriptional regulator | - |
| HZS92_RS22300 (HZS92_06094) | 70048..70401 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| HZS92_RS22305 (HZS92_06095) | 70450..71159 | - | 710 | Protein_82 | StbB family protein | - |
| HZS92_RS22310 (HZS92_06096) | 71156..71602 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| HZS92_RS22315 (HZS92_06097) | 71950..72345 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| HZS92_RS22320 | 72345..72518 | + | 174 | Protein_85 | hypothetical protein | - |
| HZS92_RS22325 (HZS92_06098) | 72610..72905 | - | 296 | Protein_86 | transposase | - |
| HZS92_RS22330 (HZS92_06100) | 73118..73573 | + | 456 | WP_011052975.1 | hypothetical protein | - |
| HZS92_RS22335 (HZS92_06101) | 73772..74113 | + | 342 | WP_031425612.1 | hypothetical protein | - |
| HZS92_RS22340 (HZS92_06102) | 74372..75946 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| HZS92_RS22345 (HZS92_06103) | 75960..78935 | + | 2976 | WP_045715643.1 | Multifunctional conjugation protein TraI | Relaxase |
| HZS92_RS22350 (HZS92_06104) | 78989..79315 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| HZS92_RS22355 (HZS92_06105) | 79312..79482 | - | 171 | WP_017157755.1 | antitoxin MazE family protein | Antitoxin Detail |
| HZS92_RS22360 (HZS92_06106) | 79667..80053 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| HZS92_RS22365 (HZS92_06107) | 80130..80549 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| HZS92_RS22370 (HZS92_06108) | 80675..81553 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| HZS92_RS22375 (HZS92_06109) | 81564..82586 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| HZS92_RS22380 (HZS92_06110) | 82597..83817 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| HZS92_RS22385 (HZS92_06111) | 83819..84601 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| HZS92_RS22390 (HZS92_06112) | 84626..85300 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| HZS92_RS22395 (HZS92_06113) | 85297..86163 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| HZS92_RS22400 (HZS92_06114) | 86165..86545 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| HZS92_RS22405 (HZS92_06115) | 86538..86750 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| HZS92_RS22410 (HZS92_06116) | 86798..87466 | - | 669 | WP_015462618.1 | type IV secretion system protein | - |
| HZS92_RS22415 (HZS92_06117) | 87463..90096 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| HZS92_RS22420 (HZS92_06118) | 90119..90418 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| HZS92_RS22425 (HZS92_06119) | 90415..90792 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| HZS92_RS22430 (HZS92_06120) | 90813..91103 | - | 291 | WP_003490957.1 | hypothetical protein | - |
| HZS92_RS22435 | 91416..91631 | + | 216 | WP_155400515.1 | hypothetical protein | - |
| HZS92_RS22440 (HZS92_06122) | 91796..92882 | - | 1087 | Protein_109 | IS3 family transposase ISXac2 | Transposase |
| HZS92_RS22445 (HZS92_06123) | 92997..93233 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| HZS92_RS22450 (HZS92_06124) | 93237..93566 | - | 330 | WP_011052996.1 | TrfB-related DNA-binding protein | - |
| HZS92_RS22455 (HZS92_06125) | 93618..94649 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| HZS92_RS22460 (HZS92_06126) | 94663..95430 | - | 768 | WP_011052998.1 | ParA family protein | - |
| HZS92_RS22465 (HZS92_06128) | 96235..97461 | - | 1227 | WP_015472949.1 | replication protein RepA | - |
| HZS92_RS22470 (HZS92_06129) | 97741..98928 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| HZS92_RS22475 (HZS92_06130) | 98935..99198 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| HZS92_RS22480 (HZS92_06131) | 99223..99624 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZS92_RS22485 (HZS92_06132) | 99621..99881 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HZS92_RS22490 (HZS92_06134) | 100072..100644 | + | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| HZS92_RS22495 (HZS92_06135) | 100675..101263 | - | 589 | Protein_120 | IS3 family transposase ISXac3 | Transposase |
| HZS92_RS22500 (HZS92_06139) | 102817..106308 | + | 3492 | WP_219865221.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| HZS92_RS22505 (HZS92_06140) | 106628..107587 | - | 960 | WP_250160405.1 | replication protein RepA | - |
| HZS92_RS22515 | 108751..108954 | - | 204 | WP_219865222.1 | hypothetical protein | - |
| HZS92_RS22520 (HZS92_06144) | 108997..109269 | - | 273 | WP_057675818.1 | hypothetical protein | - |
| HZS92_RS22525 (HZS92_06145) | 109321..109968 | - | 648 | WP_057675820.1 | AAA family ATPase | - |
| HZS92_RS22530 (HZS92_06146) | 110083..110430 | - | 348 | WP_057675823.1 | hypothetical protein | - |
| HZS92_RS22535 (HZS92_06147) | 110547..111008 | - | 462 | WP_131830026.1 | hypothetical protein | - |
| HZS92_RS22540 (HZS92_06148) | 111060..111386 | - | 327 | WP_057675825.1 | hypothetical protein | - |
| HZS92_RS22545 (HZS92_06149) | 111425..111883 | - | 459 | WP_058967993.1 | hypothetical protein | - |
| HZS92_RS23530 | 112013..112444 | + | 432 | WP_236730926.1 | hypothetical protein | - |
| HZS92_RS22555 (HZS92_06151) | 112537..113394 | - | 858 | WP_057675716.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| HZS92_RS22560 (HZS92_06152) | 113387..114301 | - | 915 | WP_057675718.1 | hypothetical protein | - |
| HZS92_RS22565 (HZS92_06153) | 114587..115030 | + | 444 | WP_131830027.1 | hypothetical protein | - |
| HZS92_RS22570 (HZS92_06154) | 115155..117395 | + | 2241 | WP_078532850.1 | DotA/TraY family protein | - |
| HZS92_RS22575 (HZS92_06155) | 117585..118136 | - | 552 | WP_236730933.1 | heat-shock protein | - |
| HZS92_RS22580 (HZS92_06156) | 118242..118763 | - | 522 | WP_057675795.1 | 3'-5' exoribonuclease | - |
| HZS92_RS22590 (HZS92_06158) | 119089..119373 | - | 285 | WP_057675793.1 | hypothetical protein | - |
| HZS92_RS22595 (HZS92_06159) | 119473..119673 | - | 201 | WP_058967995.1 | ribbon-helix-helix domain-containing protein | - |
| HZS92_RS22600 (HZS92_06160) | 119685..120047 | - | 363 | WP_057675791.1 | hypothetical protein | - |
| HZS92_RS22605 (HZS92_06161) | 120103..121656 | - | 1554 | WP_236742881.1 | MobQ family relaxase | - |
| HZS92_RS22610 (HZS92_06162) | 121781..122014 | + | 234 | WP_219865223.1 | plasmid mobilization protein | - |
| HZS92_RS22615 (HZS92_06163) | 122008..122577 | - | 570 | Protein_143 | UPF0149 family protein | - |
| HZS92_RS22620 (HZS92_06164) | 122596..123810 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| HZS92_RS22625 | 123884..124066 | - | 183 | Protein_145 | UPF0149 family protein | - |
| HZS92_RS22630 (HZS92_06166) | 124085..127060 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| HZS92_RS22635 (HZS92_06167) | 127065..127484 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| HZS92_RS22640 (HZS92_06168) | 127484..127723 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| HZS92_RS22645 (HZS92_06169) | 127937..128860 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| HZS92_RS22650 | 128904..129086 | + | 183 | Protein_150 | helix-turn-helix domain-containing protein | - |
| HZS92_RS22655 (HZS92_06171) | 129217..129633 | - | 417 | WP_087962480.1 | transposase | - |
| HZS92_RS22660 (HZS92_06172) | 129687..129893 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| HZS92_RS22665 (HZS92_06173) | 129943..130272 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| HZS92_RS22670 (HZS92_06174) | 130419..131018 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| HZS92_RS22675 (HZS92_06175) | 131345..131794 | + | 450 | WP_015462602.1 | hypothetical protein | - |
| HZS92_RS22680 (HZS92_06176) | 131791..132396 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| HZS92_RS22685 (HZS92_06177) | 132393..132890 | + | 498 | Protein_157 | hypothetical protein | - |
| HZS92_RS22690 (HZS92_06178) | 133015..133359 | - | 345 | WP_075150220.1 | hypothetical protein | - |
| HZS92_RS22695 (HZS92_06179) | 133402..134679 | - | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| HZS92_RS22700 (HZS92_06180) | 134812..137418 | - | 2607 | Protein_160 | Tn3 family transposase TnpA_TnXax1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|