MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP058742 Location: 1821980..1865207 Organism: Streptococcus suis strain 10 Replicon: chromosome
Accession: NZ_CP058742 Location: 1821980..1865207 Organism: Streptococcus suis strain 10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSU10_RS08985 () | 1817922..1821041 | + | 3120 | WP_012775354.1 | LPXTG cell wall anchor domain-containing protein | - |
| SSU10_RS08990 () | 1821121..1821987 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| SSU10_RS08995 () | 1821980..1822984 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| SSU10_RS09000 () | 1823130..1823903 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| SSU10_RS09005 () | 1823896..1824717 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| SSU10_RS09010 () | 1824727..1825764 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| SSU10_RS09015 () | 1825878..1828331 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| SSU10_RS09020 () | 1828337..1828795 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| SSU10_RS09025 () | 1828945..1829283 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| SSU10_RS09030 () | 1829283..1829984 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| SSU10_RS09035 () | 1830247..1831287 | - | 1041 | WP_012027862.1 | elongation factor Ts | - |
| SSU10_RS09040 () | 1831443..1832219 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| SSU10_RS09045 () | 1832566..1833078 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| SSU10_RS09055 () | 1833732..1838810 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| SSU10_RS09060 () | 1838954..1839493 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| SSU10_RS09065 () | 1839603..1839779 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| SSU10_RS09070 () | 1839789..1839941 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| SSU10_RS09075 () | 1839975..1842188 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| SSU10_RS09080 () | 1842341..1843309 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| SSU10_RS09085 () | 1843311..1844177 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| SSU10_RS09090 () | 1844204..1845016 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| SSU10_RS09095 () | 1845118..1845984 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| SSU10_RS09100 () | 1845984..1846925 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| SSU10_RS09105 () | 1846915..1848153 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| SSU10_RS09110 () | 1848154..1848786 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| SSU10_RS09115 () | 1848779..1849438 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| SSU10_RS09120 () | 1849453..1850328 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| SSU10_RS09130 () | 1851225..1852802 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| SSU10_RS09135 () | 1852799..1854046 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| SSU10_RS09140 () | 1854409..1855272 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| SSU10_RS09145 () | 1855762..1858206 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| SSU10_RS09150 () | 1858219..1859949 | - | 1731 | WP_012775361.1 | membrane protein | - |
| SSU10_RS09155 () | 1860314..1861222 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| SSU10_RS09160 () | 1861206..1861736 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| SSU10_RS09165 () | 1861750..1862007 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| SSU10_RS09170 () | 1862009..1862269 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SSU10_RS09175 () | 1862345..1862800 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| SSU10_RS09180 () | 1862807..1863136 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SSU10_RS09185 () | 1863126..1863413 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| SSU10_RS09190 () | 1863511..1863879 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| SSU10_RS09195 () | 1863872..1864441 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| SSU10_RS09200 () | 1864425..1865207 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| SSU10_RS09205 () | 1865314..1865451 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| SSU10_RS09210 () | 1865619..1866614 | - | 996 | WP_012775367.1 | protein jag | - |
| SSU10_RS09215 () | 1866634..1867446 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| SSU10_RS09220 () | 1867430..1867789 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| SSU10_RS09225 () | 1867860..1869254 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |