MGE detailed information
MGE type: Prophage MGE length: 125566 bp
Accession: NZ_CP055302 Location: 1235768..1361333 Organism: Mannheimia pernigra strain 16CN0041 Replicon: chromosome
Accession: NZ_CP055302 Location: 1235768..1361333 Organism: Mannheimia pernigra strain 16CN0041 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV561_RS06100 () | 1230854..1231237 | + | 384 | WP_018651776.1 | Fe-S cluster assembly scaffold IscU | - |
| HV561_RS06105 () | 1231362..1231685 | + | 324 | WP_159629561.1 | iron-sulfur cluster assembly protein IscA | - |
| HV561_RS06110 () | 1231695..1232216 | + | 522 | WP_176808202.1 | Fe-S protein assembly co-chaperone HscB | - |
| HV561_RS06115 () | 1232251..1232883 | + | 633 | WP_176808203.1 | DUF2625 family protein | - |
| HV561_RS06120 () | 1232941..1234794 | + | 1854 | WP_176808204.1 | Fe-S protein assembly chaperone HscA | - |
| HV561_RS06125 () | 1234803..1235168 | + | 366 | WP_176808205.1 | hypothetical protein | - |
| HV561_RS06130 () | 1235185..1235526 | + | 342 | WP_176808206.1 | ISC system 2Fe-2S type ferredoxin | - |
| HV561_RS06135 () | 1235526..1235720 | + | 195 | WP_159629574.1 | Fe-S cluster assembly protein IscX | - |
| HV561_RS06140 () | 1235768..1237006 | - | 1239 | WP_176808207.1 | multifunctional CCA addition/repair protein | - |
| HV561_RS06145 () | 1237132..1238187 | - | 1056 | WP_176808208.1 | hypothetical protein ; Integrase | Integrase |
| HV561_RS06150 () | 1238147..1238419 | - | 273 | WP_176808209.1 | DUF4224 domain-containing protein | - |
| HV561_RS06155 () | 1239124..1240098 | - | 975 | Protein_1166 | DNA cytosine methyltransferase | - |
| HV561_RS06160 () | 1240095..1241000 | - | 906 | WP_176808210.1 | SAM-dependent methyltransferase | - |
| HV561_RS06165 () | 1241322..1242044 | - | 723 | WP_176808211.1 | hypothetical protein | - |
| HV561_RS06170 () | 1242393..1242857 | - | 465 | WP_176808212.1 | DUF4760 domain-containing protein | - |
| HV561_RS06175 () | 1243178..1243366 | + | 189 | WP_176808213.1 | hypothetical protein | - |
| HV561_RS06180 () | 1243569..1243865 | - | 297 | WP_176808214.1 | hypothetical protein | - |
| HV561_RS06185 () | 1243865..1244329 | - | 465 | WP_176808215.1 | MazG-like family protein | - |
| HV561_RS06190 () | 1244336..1244857 | - | 522 | WP_176808216.1 | DUF551 domain-containing protein | - |
| HV561_RS06195 () | 1244989..1245423 | - | 435 | WP_176808217.1 | pyruvate kinase | - |
| HV561_RS06200 () | 1245425..1245754 | - | 330 | WP_176808218.1 | hypothetical protein | - |
| HV561_RS06205 () | 1245751..1246593 | - | 843 | WP_176808219.1 | hypothetical protein | - |
| HV561_RS06210 () | 1246596..1247492 | - | 897 | WP_176808220.1 | recombination-associated protein RdgC | - |
| HV561_RS06215 () | 1247553..1248290 | - | 738 | WP_176808221.1 | polymer-forming cytoskeletal protein | - |
| HV561_RS06220 () | 1248367..1248981 | - | 615 | WP_176808222.1 | YqaJ viral recombinase family protein | - |
| HV561_RS06225 () | 1248978..1249781 | - | 804 | WP_176808223.1 | phage recombination protein Bet | - |
| HV561_RS06230 () | 1249986..1250600 | - | 615 | WP_176808224.1 | KilA-N domain-containing protein | - |
| HV561_RS06235 () | 1250897..1251223 | - | 327 | WP_176808225.1 | hypothetical protein | - |
| HV561_RS06240 () | 1251216..1251629 | - | 414 | WP_176808226.1 | hypothetical protein | - |
| HV561_RS06245 () | 1251638..1252576 | - | 939 | WP_176808227.1 | hypothetical protein | - |
| HV561_RS06250 () | 1252579..1252755 | - | 177 | WP_176807314.1 | hypothetical protein | - |
| HV561_RS06255 () | 1252763..1252903 | - | 141 | WP_176808228.1 | hypothetical protein | - |
| HV561_RS06260 () | 1252896..1253261 | - | 366 | WP_176808229.1 | helix-turn-helix domain-containing protein | - |
| HV561_RS06265 () | 1253258..1253401 | - | 144 | WP_176807315.1 | hypothetical protein | - |
| HV561_RS06270 () | 1254113..1254343 | - | 231 | WP_006250250.1 | hypothetical protein | - |
| HV561_RS06275 () | 1254635..1254910 | + | 276 | WP_006250986.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV561_RS06280 () | 1254919..1255224 | + | 306 | WP_006253368.1 | HigA family addiction module antidote protein | - |
| HV561_RS06285 () | 1255362..1256402 | - | 1041 | WP_096864247.1 | IS481 family transposase ISShes15 | Transposase |
| HV561_RS06290 () | 1256512..1256997 | - | 486 | WP_171814961.1 | hypothetical protein | - |
| HV561_RS06295 () | 1257002..1257382 | - | 381 | WP_006248823.1 | hypothetical protein | - |
| HV561_RS06300 () | 1257433..1258092 | - | 660 | WP_006250079.1 | XRE family transcriptional regulator | - |
| HV561_RS06305 () | 1258222..1258428 | + | 207 | WP_006250080.1 | helix-turn-helix domain-containing protein | - |
| HV561_RS06310 () | 1258449..1258709 | + | 261 | WP_006253537.1 | hypothetical protein | - |
| HV561_RS06315 () | 1258873..1259043 | + | 171 | WP_006250083.1 | hypothetical protein | - |
| HV561_RS06320 () | 1259018..1259887 | + | 870 | WP_006250084.1 | replication protein | - |
| HV561_RS06325 () | 1259884..1261245 | + | 1362 | WP_006250085.1 | replicative DNA helicase | - |
| HV561_RS06330 () | 1261242..1261814 | + | 573 | WP_176808230.1 | adenine methyltransferase | - |
| HV561_RS06335 () | 1261933..1262385 | + | 453 | WP_176808231.1 | DUF1367 family protein | - |
| HV561_RS06340 () | 1262394..1262594 | + | 201 | WP_176808232.1 | hypothetical protein | - |
| HV561_RS06345 () | 1262643..1263311 | - | 669 | WP_176808233.1 | hypothetical protein | - |
| HV561_RS06350 () | 1263569..1264021 | - | 453 | WP_176808234.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HV561_RS06355 () | 1264050..1264232 | - | 183 | WP_176808235.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HV561_RS06360 () | 1264353..1264922 | + | 570 | WP_176808236.1 | recombination protein NinG | - |
| HV561_RS06365 () | 1264912..1265385 | + | 474 | WP_176808237.1 | hypothetical protein | - |
| HV561_RS06380 () | 1265672..1266247 | - | 576 | WP_176808238.1 | hypothetical protein | - |
| HV561_RS06385 () | 1266360..1266605 | + | 246 | WP_176808239.1 | hypothetical protein | - |
| HV561_RS06390 () | 1266602..1267141 | + | 540 | WP_176808240.1 | lysozyme | - |
| HV561_RS06395 () | 1267114..1267464 | + | 351 | WP_176808241.1 | DUF2570 domain-containing protein | - |
| HV561_RS06400 () | 1267469..1267642 | + | 174 | WP_176808242.1 | hypothetical protein | - |
| HV561_RS06410 () | 1268043..1268567 | + | 525 | WP_176808244.1 | terminase small subunit | - |
| HV561_RS06415 () | 1268551..1269771 | + | 1221 | WP_176809008.1 | PBSX family phage terminase large subunit | - |
| HV561_RS06420 () | 1269768..1271144 | + | 1377 | WP_176808245.1 | DUF1073 domain-containing protein | - |
| HV561_RS06425 () | 1271098..1272036 | + | 939 | WP_176808246.1 | phage head morphogenesis protein | - |
| HV561_RS06430 () | 1272023..1273390 | + | 1368 | WP_176808247.1 | DUF2213 domain-containing protein | - |
| HV561_RS06435 () | 1273383..1273817 | + | 435 | WP_176808248.1 | hypothetical protein | - |
| HV561_RS06440 () | 1273829..1274818 | + | 990 | WP_176808249.1 | encapsulin | - |
| HV561_RS06445 () | 1274830..1275036 | + | 207 | WP_176808250.1 | hypothetical protein | - |
| HV561_RS06450 () | 1275039..1275416 | + | 378 | WP_176808251.1 | hypothetical protein | - |
| HV561_RS06455 () | 1275416..1275763 | + | 348 | WP_176808252.1 | hypothetical protein | - |
| HV561_RS06460 () | 1275763..1276131 | + | 369 | WP_176808253.1 | HK97 gp10 family phage protein | - |
| HV561_RS06465 () | 1276128..1276502 | + | 375 | WP_176808254.1 | hypothetical protein | - |
| HV561_RS06470 () | 1276514..1276993 | + | 480 | WP_176808255.1 | phage tail protein | - |
| HV561_RS06475 () | 1277038..1277454 | - | 417 | WP_176808256.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HV561_RS06480 () | 1277512..1277688 | - | 177 | WP_016527644.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HV561_RS06485 () | 1277785..1278450 | + | 666 | WP_176808257.1 | hypothetical protein | - |
| HV561_RS06490 () | 1278465..1278698 | - | 234 | WP_176808258.1 | hypothetical protein | - |
| HV561_RS06495 () | 1278867..1279325 | + | 459 | WP_176808259.1 | hypothetical protein | - |
| HV561_RS06500 () | 1279560..1282055 | + | 2496 | WP_176808260.1 | phage tail length tape measure family protein | - |
| HV561_RS06505 () | 1282060..1282389 | + | 330 | WP_176808261.1 | phage tail protein | - |
| HV561_RS06510 () | 1282389..1283126 | + | 738 | WP_176808262.1 | phage minor tail protein L | - |
| HV561_RS06515 () | 1283128..1283925 | + | 798 | WP_176808263.1 | C40 family peptidase | - |
| HV561_RS06520 () | 1283925..1284431 | + | 507 | WP_176809009.1 | tail assembly protein | - |
| HV561_RS06525 () | 1284513..1289099 | + | 4587 | WP_176808264.1 | DUF1983 domain-containing protein | - |
| HV561_RS06530 () | 1289157..1289456 | - | 300 | WP_176809010.1 | helix-turn-helix transcriptional regulator | - |
| HV561_RS06535 () | 1289632..1289925 | + | 294 | WP_176808265.1 | hypothetical protein | - |
| HV561_RS06540 () | 1290187..1290291 | - | 105 | Protein_1240 | SAM-dependent methyltransferase | - |
| HV561_RS06545 () | 1290613..1291281 | - | 669 | WP_176808266.1 | hypothetical protein | - |
| HV561_RS06550 () | 1291630..1292094 | - | 465 | WP_176808212.1 | DUF4760 domain-containing protein | - |
| HV561_RS06555 () | 1292415..1292603 | + | 189 | WP_176808213.1 | hypothetical protein | - |
| HV561_RS06560 () | 1292806..1293102 | - | 297 | WP_176808214.1 | hypothetical protein | - |
| HV561_RS06565 () | 1293102..1293566 | - | 465 | WP_176808215.1 | MazG-like family protein | - |
| HV561_RS06570 () | 1293573..1294094 | - | 522 | WP_176808216.1 | DUF551 domain-containing protein | - |
| HV561_RS06575 () | 1294226..1294660 | - | 435 | WP_176808217.1 | pyruvate kinase | - |
| HV561_RS06580 () | 1294662..1294991 | - | 330 | WP_176808218.1 | hypothetical protein | - |
| HV561_RS06585 () | 1294988..1295830 | - | 843 | WP_176808219.1 | hypothetical protein | - |
| HV561_RS06590 () | 1295833..1296729 | - | 897 | WP_176808220.1 | recombination-associated protein RdgC | - |
| HV561_RS06595 () | 1296790..1297527 | - | 738 | WP_176808221.1 | polymer-forming cytoskeletal protein | - |
| HV561_RS06600 () | 1297604..1298218 | - | 615 | WP_176808222.1 | YqaJ viral recombinase family protein | - |
| HV561_RS06605 () | 1298215..1299018 | - | 804 | WP_176808223.1 | phage recombination protein Bet | - |
| HV561_RS06610 () | 1299223..1299837 | - | 615 | WP_176808224.1 | KilA-N domain-containing protein | - |
| HV561_RS06615 () | 1300134..1300460 | - | 327 | WP_176808225.1 | hypothetical protein | - |
| HV561_RS06620 () | 1300453..1300866 | - | 414 | WP_176808226.1 | hypothetical protein | - |
| HV561_RS06625 () | 1300875..1301813 | - | 939 | WP_176808227.1 | hypothetical protein | - |
| HV561_RS06630 () | 1301816..1301992 | - | 177 | WP_176807314.1 | hypothetical protein | - |
| HV561_RS06635 () | 1302000..1302140 | - | 141 | WP_176808228.1 | hypothetical protein | - |
| HV561_RS06640 () | 1302133..1302498 | - | 366 | WP_176808229.1 | helix-turn-helix domain-containing protein | - |
| HV561_RS06645 () | 1302495..1302638 | - | 144 | WP_176807315.1 | hypothetical protein | - |
| HV561_RS06650 () | 1303350..1303586 | - | 237 | WP_176808267.1 | hypothetical protein | - |
| HV561_RS06655 () | 1303583..1303801 | - | 219 | WP_176808268.1 | hypothetical protein | - |
| HV561_RS06660 () | 1304117..1304413 | + | 297 | WP_176808269.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HV561_RS06665 () | 1304415..1304705 | + | 291 | WP_176808270.1 | putative addiction module antidote protein | Antitoxin Detail |
| HV561_RS06670 () | 1304795..1305277 | - | 483 | Protein_1266 | IS481 family transposase ISVvu4 | Transposase |
| HV561_RS06675 () | 1305302..1305787 | - | 486 | WP_176809011.1 | hypothetical protein | - |
| HV561_RS06680 () | 1305792..1306172 | - | 381 | WP_176808271.1 | hypothetical protein | - |
| HV561_RS06685 () | 1306186..1306872 | - | 687 | WP_176808272.1 | S24 family peptidase | - |
| HV561_RS06690 () | 1307001..1307234 | + | 234 | WP_032848913.1 | antirepressor protein Cro | - |
| HV561_RS06695 () | 1307303..1308238 | + | 936 | Protein_1271 | DNA helicase | - |
| HV561_RS06700 () | 1308245..1308703 | + | 459 | Protein_1272 | replication protein | - |
| HV561_RS06705 () | 1308700..1309272 | + | 573 | WP_176808230.1 | adenine methyltransferase | - |
| HV561_RS06710 () | 1309391..1309843 | + | 453 | WP_176808231.1 | DUF1367 family protein | - |
| HV561_RS06715 () | 1309852..1310052 | + | 201 | WP_176808232.1 | hypothetical protein | - |
| HV561_RS06720 () | 1310443..1310763 | - | 321 | Protein_1276 | phage repressor protein | - |
| HV561_RS06725 () | 1311070..1311522 | - | 453 | WP_176808234.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HV561_RS06730 () | 1311551..1311733 | - | 183 | WP_176808235.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HV561_RS06735 () | 1311854..1312423 | + | 570 | WP_176808236.1 | recombination protein NinG | - |
| HV561_RS06740 () | 1312413..1312886 | + | 474 | WP_176808237.1 | hypothetical protein | - |
| HV561_RS06755 () | 1313173..1313748 | - | 576 | WP_176808238.1 | hypothetical protein | - |
| HV561_RS06760 () | 1313861..1314106 | + | 246 | WP_176808239.1 | hypothetical protein | - |
| HV561_RS06765 () | 1314103..1314642 | + | 540 | WP_176808240.1 | lysozyme | - |
| HV561_RS06770 () | 1314615..1314965 | + | 351 | WP_176808241.1 | DUF2570 domain-containing protein | - |
| HV561_RS06775 () | 1314970..1315143 | + | 174 | WP_176808242.1 | hypothetical protein | - |
| HV561_RS06785 () | 1315544..1316068 | + | 525 | WP_176808244.1 | terminase small subunit | - |
| HV561_RS06790 () | 1316052..1317284 | + | 1233 | WP_176809012.1 | PBSX family phage terminase large subunit | - |
| HV561_RS06795 () | 1317297..1318700 | + | 1404 | WP_176808273.1 | DUF4055 domain-containing protein | - |
| HV561_RS06800 () | 1318648..1319697 | + | 1050 | Protein_1289 | minor capsid protein | - |
| HV561_RS06805 () | 1320418..1320615 | + | 198 | WP_176808274.1 | hypothetical protein | - |
| HV561_RS06810 () | 1320724..1321458 | + | 735 | WP_176808275.1 | hypothetical protein | - |
| HV561_RS06815 () | 1321524..1322471 | + | 948 | WP_176808276.1 | hypothetical protein | - |
| HV561_RS06820 () | 1322526..1322876 | + | 351 | WP_176808277.1 | hypothetical protein | - |
| HV561_RS06825 () | 1322866..1323303 | + | 438 | WP_176808278.1 | hypothetical protein | - |
| HV561_RS06830 () | 1323303..1323674 | + | 372 | WP_176808279.1 | hypothetical protein | - |
| HV561_RS06835 () | 1323667..1324080 | + | 414 | WP_176808280.1 | HK97 gp10 family phage protein | - |
| HV561_RS06840 () | 1324080..1324472 | + | 393 | WP_176808281.1 | hypothetical protein | - |
| HV561_RS06845 () | 1324482..1325504 | + | 1023 | WP_176808282.1 | hypothetical protein | - |
| HV561_RS06850 () | 1325594..1325995 | + | 402 | WP_176808283.1 | hypothetical protein | - |
| HV561_RS06855 () | 1326010..1326336 | + | 327 | WP_176808284.1 | hypothetical protein | - |
| HV561_RS06860 () | 1326338..1326664 | + | 327 | WP_075271877.1 | phage tail protein | - |
| HV561_RS06865 () | 1326746..1327456 | + | 711 | WP_176808285.1 | hypothetical protein | - |
| HV561_RS11310 () | 1327516..1328340 | + | 825 | Protein_1303 | tape measure protein | - |
| HV561_RS11315 () | 1330381..1330539 | + | 159 | Protein_1304 | phage minor tail protein L | - |
| HV561_RS06875 () | 1330547..1331263 | + | 717 | WP_176808287.1 | phage minor tail protein L | - |
| HV561_RS06880 () | 1331267..1331998 | + | 732 | WP_176808288.1 | C40 family peptidase | - |
| HV561_RS06885 () | 1332028..1332654 | + | 627 | WP_176808289.1 | tail assembly protein | - |
| HV561_RS06890 () | 1332658..1334943 | + | 2286 | Protein_1308 | host specificity protein J | - |
| HV561_RS06895 () | 1334944..1337205 | + | 2262 | WP_176809013.1 | DUF1983 domain-containing protein | - |
| HV561_RS06900 () | 1337263..1337562 | - | 300 | WP_176809010.1 | helix-turn-helix transcriptional regulator | - |
| HV561_RS06905 () | 1337738..1338031 | + | 294 | WP_176808265.1 | hypothetical protein | - |
| HV561_RS06910 () | 1338292..1338927 | - | 636 | WP_176808290.1 | endonuclease III | - |
| HV561_RS06915 () | 1338930..1339694 | - | 765 | WP_176808291.1 | TSUP family transporter | - |
| HV561_RS06920 () | 1339694..1340785 | - | 1092 | WP_159629587.1 | glutamate 5-kinase | - |
| HV561_RS06925 () | 1340899..1341393 | + | 495 | WP_159629590.1 | dihydrofolate reductase | - |
| HV561_RS06930 () | 1341521..1341754 | + | 234 | WP_159629593.1 | YgjV family protein | - |
| HV561_RS06935 () | 1341793..1343172 | - | 1380 | WP_176808292.1 | DNA repair protein RadA | - |
| HV561_RS06940 () | 1343353..1343796 | + | 444 | WP_176808293.1 | hypothetical protein | VF |
| HV561_RS06945 () | 1343818..1345218 | + | 1401 | WP_176808294.1 | hypothetical protein | VF |
| HV561_RS06950 () | 1345202..1346395 | + | 1194 | WP_176808295.1 | type II secretion system F family protein | - |
| HV561_RS06955 () | 1346398..1347054 | + | 657 | WP_176808296.1 | prepilin peptidase | - |
| HV561_RS06960 () | 1347086..1347889 | + | 804 | WP_202880427.1 | dephospho-CoA kinase | - |
| HV561_RS06970 () | 1347890..1348912 | - | 1023 | WP_176808297.1 | DNA polymerase III subunit delta | - |
| HV561_RS06975 () | 1348953..1349441 | - | 489 | WP_176808298.1 | hypothetical protein | - |
| HV561_RS06980 () | 1349500..1352085 | - | 2586 | WP_176808299.1 | leucine--tRNA ligase | - |
| HV561_RS06985 () | 1352357..1352791 | + | 435 | WP_176808300.1 | mor transcription activator family protein | - |
| HV561_RS06990 () | 1352879..1353412 | + | 534 | WP_176808301.1 | glycoside hydrolase family 108 protein | - |
| HV561_RS06995 () | 1353415..1353660 | + | 246 | WP_176808302.1 | DUF2644 domain-containing protein | - |
| HV561_RS07000 () | 1353657..1354016 | + | 360 | WP_176808303.1 | DUF2681 domain-containing protein | - |
| HV561_RS07005 () | 1354031..1354186 | + | 156 | WP_006248649.1 | hypothetical protein | - |
| HV561_RS07010 () | 1354179..1354370 | + | 192 | WP_176807316.1 | hypothetical protein | - |
| HV561_RS07015 () | 1354298..1354594 | + | 297 | Protein_1332 | DUF935 family protein | - |
| HV561_RS07020 () | 1354581..1355852 | + | 1272 | WP_176808304.1 | minor capsid protein | - |
| HV561_RS07025 () | 1356008..1356424 | + | 417 | WP_176808305.1 | phage virion morphogenesis protein | - |
| HV561_RS07030 () | 1356704..1358512 | - | 1809 | WP_176808306.1 | hypothetical protein | VF |
| HV561_RS07035 () | 1358620..1359021 | - | 402 | WP_176808307.1 | hypothetical protein | - |
| HV561_RS07040 () | 1359024..1361333 | - | 2310 | WP_176808308.1 | M23 family metallopeptidase | - |
| HV561_RS07045 () | 1361346..1361897 | - | 552 | WP_176808309.1 | hypothetical protein | - |
| HV561_RS07050 () | 1361934..1362287 | - | 354 | WP_176808310.1 | hypothetical protein | - |
| HV561_RS07055 () | 1362280..1362567 | - | 288 | WP_176809014.1 | DUF2345 domain-containing protein | - |
| HV561_RS07060 () | 1362731..1363372 | - | 642 | WP_176808311.1 | hypothetical protein | - |
| HV561_RS07065 () | 1363369..1364514 | - | 1146 | WP_176808312.1 | PAAR domain-containing protein | - |
| HV561_RS07070 () | 1364767..1365600 | + | 834 | WP_176808313.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|