MGE detailed information
MGE type: Prophage MGE length: 67968 bp
Accession: NZ_CP054060 Location: 1936155..2004122 Organism: Edwardsiella ictaluri strain T1-1 Replicon: chromosome
Accession: NZ_CP054060 Location: 1936155..2004122 Organism: Edwardsiella ictaluri strain T1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F8539_RS09140 () | 1931536..1932120 | + | 585 | WP_015871285.1 | Slp family lipoprotein | - |
| F8539_RS09145 () | 1933626..1933937 | + | 312 | WP_035608226.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| F8539_RS09150 () | 1933993..1934922 | + | 930 | WP_015871288.1 | cation diffusion facilitator family transporter | - |
| F8539_RS09155 () | 1935195..1935593 | + | 399 | WP_035608229.1 | hypothetical protein | - |
| F8539_RS09160 () | 1935780..1935956 | + | 177 | WP_155961442.1 | hypothetical protein | - |
| F8539_RS09165 () | 1935898..1936149 | + | 252 | Protein_1761 | SUMF1/EgtB/PvdO family nonheme iron enzyme | - |
| F8539_RS09170 () | 1936155..1937186 | - | 1032 | Protein_1762 | IS630 family transposase ISEc33 | Transposase |
| F8539_RS09175 () | 1937893..1939378 | - | 1486 | Protein_1763 | C69 family dipeptidase | - |
| F8539_RS09180 () | 1939637..1940056 | + | 420 | WP_015871294.1 | universal stress protein | - |
| F8539_RS09185 () | 1940157..1940908 | - | 752 | Protein_1765 | IS5 family transposase IS1421 | Transposase |
| F8539_RS09190 () | 1940969..1941205 | + | 237 | WP_107775279.1 | hypothetical protein | - |
| F8539_RS09195 () | 1941361..1942110 | + | 750 | WP_015871296.1 | hypothetical protein | VF |
| F8539_RS09200 () | 1942214..1942579 | + | 366 | WP_015871297.1 | DUF1283 family protein | - |
| F8539_RS09205 () | 1942596..1942868 | + | 273 | WP_015871298.1 | DUF1161 domain-containing protein | - |
| F8539_RS09210 () | 1942898..1944376 | - | 1479 | WP_198077045.1 | MFS transporter | - |
| F8539_RS09215 () | 1944648..1945259 | - | 612 | WP_051142557.1 | ammonium transporter | - |
| F8539_RS09220 () | 1945269..1946077 | + | 809 | WP_198077046.1 | IS5 family transposase | - |
| F8539_RS09225 () | 1946074..1947282 | + | 1209 | WP_015870371.1 | IS256 family transposase ISEic2 | Transposase |
| F8539_RS09230 () | 1947772..1955610 | - | 7839 | WP_198077047.1 | hypothetical protein | - |
| F8539_RS09235 () | 1955710..1957161 | - | 1452 | WP_198077048.1 | cytokinesis protein SepA | - |
| F8539_RS09240 () | 1957185..1957445 | - | 261 | WP_035609819.1 | hypothetical protein | - |
| F8539_RS09245 () | 1957445..1957825 | - | 381 | Protein_1777 | hypothetical protein | - |
| F8539_RS09250 () | 1957913..1958488 | - | 576 | WP_015871305.1 | hypothetical protein | - |
| F8539_RS09255 () | 1958499..1958870 | - | 372 | WP_015871306.1 | hypothetical protein | - |
| F8539_RS09260 () | 1958867..1960405 | - | 1539 | WP_015871307.1 | DUF1983 domain-containing protein | - |
| F8539_RS09265 () | 1960402..1962030 | - | 1629 | Protein_1781 | hypothetical protein | - |
| F8539_RS09270 () | 1962211..1964325 | - | 2115 | WP_198077049.1 | tail fiber protein | - |
| F8539_RS09275 () | 1964331..1964993 | - | 663 | WP_015871312.1 | hypothetical protein | - |
| F8539_RS09280 () | 1964993..1965574 | - | 582 | WP_049640652.1 | hypothetical protein | - |
| F8539_RS09285 () | 1965574..1966017 | - | 444 | WP_015871314.1 | hypothetical protein | - |
| F8539_RS09290 () | 1966059..1966454 | - | 396 | WP_049640651.1 | hypothetical protein | - |
| F8539_RS09295 () | 1966612..1967868 | - | 1257 | WP_198077050.1 | N4-gp56 family major capsid protein | - |
| F8539_RS09300 () | 1967886..1968887 | - | 1002 | WP_015871317.1 | hypothetical protein | - |
| F8539_RS09305 () | 1969175..1969426 | + | 252 | WP_015871318.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| F8539_RS09310 () | 1969416..1969697 | + | 282 | WP_015871319.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F8539_RS09315 () | 1969769..1971883 | - | 2115 | WP_015871320.1 | hypothetical protein | - |
| F8539_RS09320 () | 1971880..1972752 | - | 873 | Protein_1792 | terminase | - |
| F8539_RS09330 () | 1973618..1974424 | - | 807 | Protein_1794 | terminase | - |
| F8539_RS09335 () | 1974402..1975186 | - | 785 | Protein_1795 | hypothetical protein | - |
| F8539_RS09340 () | 1975267..1975599 | - | 333 | Protein_1796 | DUF2514 family protein | - |
| F8539_RS09345 () | 1976029..1976580 | - | 552 | WP_015871324.1 | glycoside hydrolase family 108 protein | - |
| F8539_RS09350 () | 1976583..1976930 | - | 348 | WP_035608895.1 | phage holin, lambda family | - |
| F8539_RS09355 () | 1977014..1977343 | - | 330 | WP_049640650.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| F8539_RS09360 () | 1977318..1977548 | - | 231 | WP_015871327.1 | ParD-like family protein | - |
| F8539_RS09365 () | 1977680..1977924 | - | 245 | Protein_1801 | transposase | - |
| F8539_RS09370 () | 1978030..1978848 | - | 819 | WP_198077051.1 | hypothetical protein | - |
| F8539_RS09375 () | 1978913..1980253 | - | 1341 | WP_049640648.1 | Fic family protein | - |
| F8539_RS09380 () | 1980382..1981152 | - | 771 | WP_198077052.1 | Rha family transcriptional regulator | - |
| F8539_RS09385 () | 1981607..1981936 | + | 330 | WP_015871332.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F8539_RS09390 () | 1981926..1982234 | + | 309 | WP_015871333.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| F8539_RS09395 () | 1982485..1982742 | + | 258 | WP_198077053.1 | DUF4160 domain-containing protein | Toxin Detail |
| F8539_RS09400 () | 1982752..1983264 | + | 513 | WP_015871334.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| F8539_RS09405 () | 1983336..1983635 | - | 300 | WP_049640646.1 | XRE family transcriptional regulator | Antitoxin Detail |
| F8539_RS09410 () | 1983637..1983987 | - | 351 | WP_198077054.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| F8539_RS09415 () | 1984037..1984348 | - | 312 | WP_049640644.1 | DUF1364 domain-containing protein | - |
| F8539_RS09420 () | 1984351..1984995 | - | 645 | WP_198077055.1 | DUF1367 family protein | - |
| F8539_RS09425 () | 1985105..1985452 | - | 348 | WP_015871339.1 | hypothetical protein | - |
| F8539_RS09430 () | 1985482..1986864 | - | 1383 | WP_049640642.1 | replicative DNA helicase | - |
| F8539_RS09435 () | 1986861..1987811 | - | 951 | WP_198077056.1 | helix-turn-helix domain-containing protein | - |
| F8539_RS09440 () | 1987815..1988003 | - | 189 | WP_198077057.1 | hypothetical protein | - |
| F8539_RS09445 () | 1988013..1988273 | - | 261 | WP_015871343.1 | hypothetical protein | - |
| F8539_RS09450 () | 1988305..1988535 | - | 231 | WP_198077058.1 | porin | - |
| F8539_RS09455 () | 1988532..1988888 | - | 357 | WP_198077059.1 | hypothetical protein | - |
| F8539_RS09460 () | 1988986..1989201 | - | 216 | WP_012848463.1 | helix-turn-helix domain-containing protein | - |
| F8539_RS09465 () | 1989306..1989998 | + | 693 | WP_049640640.1 | helix-turn-helix transcriptional regulator | - |
| F8539_RS09470 () | 1990735..1992327 | + | 1593 | WP_198077060.1 | hypothetical protein | - |
| F8539_RS09475 () | 1992659..1993954 | - | 1296 | WP_198077061.1 | hypothetical protein | - |
| F8539_RS09480 () | 1994350..1994652 | + | 303 | WP_198077062.1 | hypothetical protein | - |
| F8539_RS09485 () | 1994759..1997293 | + | 2535 | WP_198077063.1 | DNA breaking-rejoining protein | - |
| F8539_RS09490 () | 1997304..1998374 | + | 1071 | WP_198077064.1 | recombinase RecT | - |
| F8539_RS09495 () | 1998393..1998698 | + | 306 | WP_198077065.1 | hypothetical protein | - |
| F8539_RS09500 () | 1998755..1998904 | + | 150 | WP_198077066.1 | potassium transporter 7 | - |
| F8539_RS09505 () | 1998933..1999400 | + | 468 | WP_198077381.1 | hypothetical protein | - |
| F8539_RS09510 () | 2000052..2000777 | + | 726 | Protein_1830 | DUF1028 domain-containing protein | - |
| F8539_RS09515 () | 2000849..2002063 | + | 1215 | WP_198077382.1 | IS256 family transposase ISEic2 | Transposase |
| F8539_RS09520 () | 2002065..2002256 | - | 192 | Protein_1832 | IS256 family transposase ISEic2 | Transposase |
| F8539_RS09525 () | 2002793..2003041 | + | 249 | WP_198077067.1 | excisionase | - |
| F8539_RS09530 () | 2003028..2004122 | + | 1095 | WP_015871362.1 | hypothetical protein ; Integrase | Integrase |
| F8539_RS09535 () | 2004332..2005041 | + | 710 | Protein_1835 | IS5 family transposase | - |
| F8539_RS09540 () | 2005112..2006320 | + | 1209 | WP_015870371.1 | IS256-like element ISEic2 family transposase | - |
| F8539_RS09545 () | 2006406..2007614 | + | 1209 | WP_015870371.1 | IS256-like element ISEic2 family transposase | - |
| F8539_RS09550 () | 2007650..2007751 | + | 102 | Protein_1838 | IS5/IS1182 family transposase | - |
| F8539_RS09555 () | 2007717..2008409 | - | 693 | WP_015871363.1 | ammonium transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|