MGE detailed information
MGE type: Integron MGE length: 73264 bp
Accession: NZ_CP053801 Location: 297172..370435 Organism: Vibrio cholerae strain SO5Y Replicon: chromosome
Accession: NZ_CP053801 Location: 297172..370435 Organism: Vibrio cholerae strain SO5Y Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY15_RS14590 () | 292492..293622 | + | 1131 | WP_046126223.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HPY15_RS14595 () | 293914..295842 | + | 1929 | WP_046126222.1 | threonine--tRNA ligase | - |
| HPY15_RS14600 () | 295846..296397 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| HPY15_RS14605 () | 296501..296695 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| HPY15_RS14610 () | 296737..297090 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| HPY15_RS14615 () | 297172..298134 | - | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| HPY15_RS14620 () | 298304..298615 | - | 312 | WP_175235960.1 | hypothetical protein | - |
| HPY15_RS14625 () | 299317..299499 | + | 183 | Protein_243 | DUF645 family protein | - |
| HPY15_RS14630 () | 299616..299711 | + | 96 | WP_175235962.1 | acetyltransferase | - |
| HPY15_RS14635 () | 299698..300126 | + | 429 | WP_145473870.1 | hypothetical protein | - |
| HPY15_RS14640 () | 300087..300233 | + | 147 | WP_145474494.1 | DUF3265 domain-containing protein | - |
| HPY15_RS14645 () | 300350..301294 | + | 945 | WP_175235964.1 | Abi family protein | - |
| HPY15_RS14650 () | 301685..301774 | + | 90 | Protein_248 | DUF645 family protein | - |
| HPY15_RS14655 () | 302130..302251 | + | 122 | Protein_249 | DUF645 family protein | - |
| HPY15_RS14660 () | 302270..302308 | + | 39 | WP_082798268.1 | hypothetical protein | - |
| HPY15_RS14665 () | 302506..303432 | + | 927 | WP_148502345.1 | PD-(D/E)XK nuclease superfamily protein | - |
| HPY15_RS14670 () | 303728..303910 | + | 183 | WP_046126209.1 | DUF645 family protein | - |
| HPY15_RS14675 () | 304109..304720 | + | 612 | WP_095430815.1 | hypothetical protein | - |
| HPY15_RS14680 () | 304714..304839 | + | 126 | WP_142741543.1 | DUF3265 domain-containing protein | - |
| HPY15_RS14685 () | 304869..305147 | - | 279 | WP_142741541.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS14690 () | 305144..305428 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HPY15_RS14695 () | 305626..306030 | + | 405 | WP_142741542.1 | DUF1801 domain-containing protein | - |
| HPY15_RS14700 () | 306179..306715 | + | 537 | WP_046126196.1 | nucleotidyltransferase family protein | - |
| HPY15_RS14705 () | 306984..307220 | + | 237 | WP_080341691.1 | DUF3709 domain-containing protein | - |
| HPY15_RS14710 () | 307484..307972 | + | 489 | WP_046126199.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS14715 () | 308621..309268 | + | 648 | WP_000376693.1 | GIY-YIG nuclease family protein | - |
| HPY15_RS14720 () | 309256..309381 | + | 126 | WP_175236093.1 | DUF3265 domain-containing protein | - |
| HPY15_RS14725 () | 309410..311233 | + | 1824 | WP_175235966.1 | hypothetical protein | - |
| HPY15_RS14730 () | 311372..311869 | + | 498 | WP_055030562.1 | DUF2867 domain-containing protein | - |
| HPY15_RS14735 () | 312400..312933 | + | 534 | WP_000679873.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS14740 () | 313074..313460 | + | 387 | WP_089069923.1 | MmcQ/YjbR family DNA-binding protein | - |
| HPY15_RS14745 () | 313755..313937 | + | 183 | WP_000947519.1 | DUF645 family protein | - |
| HPY15_RS14750 () | 314130..314447 | - | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS14755 () | 314466..314708 | - | 243 | WP_001961623.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY15_RS14760 () | 314955..315731 | + | 777 | WP_175235968.1 | hypothetical protein | - |
| HPY15_RS14765 () | 315897..316310 | + | 414 | WP_142738042.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS14770 () | 316448..316765 | - | 318 | WP_000077272.1 | CcdB family protein | - |
| HPY15_RS14775 () | 316765..317010 | - | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| HPY15_RS14780 () | 317208..317570 | + | 363 | WP_175235970.1 | hypothetical protein | - |
| HPY15_RS14785 () | 317713..318471 | + | 759 | WP_175235971.1 | restriction endonuclease | - |
| HPY15_RS14790 () | 318824..318919 | + | 96 | WP_001907607.1 | DUF645 family protein | - |
| HPY15_RS14795 () | 319129..319584 | + | 456 | WP_000432865.1 | hypothetical protein | - |
| HPY15_RS14800 () | 319885..320061 | + | 177 | WP_175235973.1 | DUF645 family protein | - |
| HPY15_RS14805 () | 320261..320779 | + | 519 | WP_172777360.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS14810 () | 320927..321457 | + | 531 | WP_175235975.1 | hypothetical protein | - |
| HPY15_RS14815 () | 321480..322439 | - | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY15_RS14820 () | 322674..323036 | + | 363 | WP_175235977.1 | hypothetical protein | - |
| HPY15_RS14825 () | 323178..323714 | + | 537 | WP_057556422.1 | hypothetical protein | - |
| HPY15_RS14830 () | 323811..324164 | + | 354 | WP_050559285.1 | DUF4144 domain-containing protein | - |
| HPY15_RS14835 () | 324425..324685 | + | 261 | WP_175236095.1 | DUF3709 domain-containing protein | - |
| HPY15_RS14840 () | 325110..325237 | + | 128 | Protein_286 | DUF645 family protein | - |
| HPY15_RS14845 () | 325253..325291 | + | 39 | WP_108244118.1 | hypothetical protein | - |
| HPY15_RS14850 () | 325486..326022 | + | 537 | WP_046126196.1 | nucleotidyltransferase family protein | - |
| HPY15_RS14855 () | 326235..326501 | + | 267 | WP_095466608.1 | hypothetical protein | - |
| HPY15_RS14860 () | 326814..326996 | + | 183 | WP_032473240.1 | DUF645 family protein | - |
| HPY15_RS14865 () | 327198..327584 | + | 387 | WP_175235979.1 | MmcQ/YjbR family DNA-binding protein | - |
| HPY15_RS14870 () | 327812..328090 | + | 279 | WP_032469024.1 | DUF3709 domain-containing protein | - |
| HPY15_RS14875 () | 328403..328573 | + | 171 | WP_046127315.1 | hypothetical protein | Antitoxin Detail |
| HPY15_RS14880 () | 328573..328974 | + | 402 | WP_046126173.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HPY15_RS14885 () | 329114..330004 | + | 891 | WP_094393050.1 | hypothetical protein | - |
| HPY15_RS14890 () | 330746..331066 | + | 321 | Protein_296 | DUF645 family protein | - |
| HPY15_RS14895 () | 331284..331462 | + | 179 | Protein_297 | DUF645 family protein | - |
| HPY15_RS14900 () | 331665..331946 | + | 282 | WP_142741056.1 | hypothetical protein | - |
| HPY15_RS14905 () | 332117..332512 | + | 396 | WP_046126178.1 | DUF3465 domain-containing protein | - |
| HPY15_RS14910 () | 332809..333027 | + | 219 | Protein_300 | DUF3709 domain-containing protein | - |
| HPY15_RS14915 () | 333300..333935 | + | 636 | WP_000691786.1 | DUF2807 domain-containing protein | - |
| HPY15_RS14920 () | 334545..335021 | + | 477 | Protein_302 | cell division protein | - |
| HPY15_RS14925 () | 335100..336020 | + | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| HPY15_RS14930 () | 336769..336948 | + | 180 | WP_032473262.1 | DUF645 family protein | - |
| HPY15_RS14935 () | 337244..337732 | + | 489 | WP_033839086.1 | RDD family protein | - |
| HPY15_RS14940 () | 337877..338293 | + | 417 | WP_019830302.1 | DUF1311 domain-containing protein | - |
| HPY15_RS14945 () | 338452..339225 | + | 774 | WP_175235981.1 | NERD domain-containing protein | - |
| HPY15_RS14950 () | 339292..339387 | + | 96 | Protein_308 | AAA family ATPase | - |
| HPY15_RS14955 () | 339361..339870 | + | 510 | WP_142741528.1 | AAA family ATPase | - |
| HPY15_RS14960 () | 340029..340442 | + | 414 | WP_071180824.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS14965 () | 340758..340922 | + | 165 | WP_080476722.1 | DUF645 family protein | - |
| HPY15_RS14970 () | 341463..341567 | + | 105 | WP_175235983.1 | acetyltransferase | - |
| HPY15_RS14975 () | 341551..342024 | + | 474 | WP_000422095.1 | hypothetical protein | - |
| HPY15_RS14980 () | 342152..342640 | + | 489 | WP_057561119.1 | dual specificity protein phosphatase family protein | - |
| HPY15_RS14985 () | 342663..343622 | - | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY15_RS14990 () | 343989..344162 | + | 174 | WP_142547423.1 | DUF3709 domain-containing protein | - |
| HPY15_RS14995 () | 344496..345152 | + | 657 | WP_017044877.1 | hypothetical protein | - |
| HPY15_RS15000 () | 345288..345629 | + | 342 | WP_142741524.1 | hypothetical protein | - |
| HPY15_RS15005 () | 345769..346632 | + | 864 | WP_175235984.1 | hypothetical protein | - |
| HPY15_RS15010 () | 346936..347856 | + | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| HPY15_RS15015 () | 347982..348332 | + | 351 | WP_175235986.1 | hypothetical protein | - |
| HPY15_RS15020 () | 348338..348493 | + | 156 | WP_175236097.1 | DUF3265 domain-containing protein | - |
| HPY15_RS15025 () | 348493..348618 | + | 126 | WP_123012141.1 | DUF3709 domain-containing protein | - |
| HPY15_RS15030 () | 348639..348860 | + | 222 | WP_142741522.1 | DUF3709 domain-containing protein | - |
| HPY15_RS15035 () | 349139..349915 | + | 777 | WP_142741520.1 | choline kinase | - |
| HPY15_RS15040 () | 350209..350391 | + | 183 | WP_175235988.1 | DUF645 family protein | - |
| HPY15_RS15045 () | 350650..350892 | + | 243 | WP_000107461.1 | hypothetical protein | - |
| HPY15_RS15050 () | 351221..351392 | + | 172 | Protein_328 | DUF645 family protein | - |
| HPY15_RS15055 () | 351600..352025 | + | 426 | WP_001287986.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| HPY15_RS15060 () | 352172..352606 | + | 435 | WP_000256034.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS15065 () | 352835..353101 | + | 267 | WP_043993103.1 | hypothetical protein | - |
| HPY15_RS15070 () | 353303..354289 | - | 987 | WP_142741518.1 | Sulfate-binding protein | VF |
| HPY15_RS15075 () | 354543..354923 | + | 381 | WP_142576968.1 | hypothetical protein | - |
| HPY15_RS15080 () | 355254..356213 | - | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY15_RS15085 () | 356368..356448 | + | 81 | WP_142741529.1 | acetyltransferase | - |
| HPY15_RS15090 () | 356463..357386 | + | 924 | WP_142741516.1 | hypothetical protein | - |
| HPY15_RS15095 () | 357362..357493 | + | 132 | WP_142741515.1 | DUF3265 domain-containing protein | - |
| HPY15_RS15100 () | 357977..358411 | + | 435 | WP_032470918.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS15105 () | 358468..358581 | + | 114 | WP_114716195.1 | acetyltransferase | - |
| HPY15_RS15110 () | 358530..358811 | + | 282 | WP_102787255.1 | DUF1289 domain-containing protein | - |
| HPY15_RS15115 () | 359066..359947 | + | 882 | WP_095465404.1 | hypothetical protein | - |
| HPY15_RS15120 () | 359947..360072 | + | 126 | WP_095465403.1 | DUF3265 domain-containing protein | - |
| HPY15_RS15125 () | 360105..360896 | + | 792 | WP_029190005.1 | PhzF family phenazine biosynthesis protein | - |
| HPY15_RS15130 () | 361072..361992 | - | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| HPY15_RS15135 () | 362132..362656 | + | 525 | WP_175235990.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS15140 () | 363293..363913 | + | 621 | WP_113629451.1 | hypothetical protein | - |
| HPY15_RS15145 () | 364422..364703 | + | 282 | WP_001894429.1 | DUF1289 domain-containing protein | - |
| HPY15_RS15150 () | 365496..365678 | + | 183 | WP_046126209.1 | DUF645 family protein | - |
| HPY15_RS15155 () | 366033..366212 | + | 180 | WP_175235991.1 | DUF645 family protein | - |
| HPY15_RS15160 () | 366566..366773 | + | 208 | Protein_350 | DUF645 family protein | - |
| HPY15_RS15165 () | 367209..367544 | + | 336 | WP_046126207.1 | hypothetical protein | - |
| HPY15_RS15170 () | 367826..368062 | + | 237 | WP_080341691.1 | DUF3709 domain-containing protein | - |
| HPY15_RS15175 () | 368217..369176 | - | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY15_RS15180 () | 369515..370435 | + | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| HPY15_RS15185 () | 370413..370937 | - | 525 | WP_142741359.1 | hypothetical protein | - |
| HPY15_RS15190 () | 371085..371822 | - | 738 | WP_046126202.1 | hypothetical protein | - |
| HPY15_RS15195 () | 371965..372313 | - | 349 | Protein_357 | GrpB family protein | - |
| HPY15_RS15200 () | 372576..373031 | - | 456 | WP_000432865.1 | hypothetical protein | - |
| HPY15_RS15205 () | 373182..373703 | - | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| HPY15_RS15210 () | 373697..373966 | - | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| HPY15_RS15215 () | 374218..374313 | - | 96 | WP_001907607.1 | DUF645 family protein | - |
| HPY15_RS15220 () | 374556..374666 | - | 111 | WP_086017781.1 | DUF3265 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|