MGE detailed information
MGE type: Conjugative plasmid MGE length: 108661 bp
Accession: NZ_CP053788 Location: 1..108661 Organism: Escherichia coli isolate J31 Replicon: plasmid pJ31
Accession: NZ_CP053788 Location: 1..108661 Organism: Escherichia coli isolate J31 Replicon: plasmid pJ31
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HQN81_RS23455 () | 455..1486 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| HQN81_RS23460 () | 2182..2394 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| HQN81_RS23465 () | 2509..3717 | - | 1209 | WP_000198533.1 | IS91 family transposase | - |
| HQN81_RS23470 () | 3698..3970 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| HQN81_RS23475 () | 4047..6461 | - | 2415 | Protein_4 | Tn3-like element TnAs1 family transposase | - |
| HQN81_RS23480 () | 6465..7025 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| HQN81_RS23485 () | 7201..7551 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HQN81_RS23490 () | 7754..8767 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| HQN81_RS23495 () | 8925..9398 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| HQN81_RS23500 () | 9529..10317 | + | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| HQN81_RS23505 () | 10519..11223 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HQN81_RS23510 () | 11276..12031 | + | 756 | Protein_11 | IS110-like element IS5075 family transposase | - |
| HQN81_RS23515 () | 12213..12389 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| HQN81_RS23520 () | 12719..13534 | + | 816 | WP_001043265.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| HQN81_RS23525 () | 13621..13923 | + | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| HQN81_RS23530 () | 13817..14068 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| HQN81_RS23535 () | 14099..15235 | - | 1137 | WP_023140202.1 | IS91 family transposase | - |
| HQN81_RS23540 () | 15602..15871 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HQN81_RS23545 () | 15868..16149 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HQN81_RS23550 () | 16189..17037 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| HQN81_RS23555 () | 17154..17627 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| HQN81_RS23560 () | 18104..18370 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| HQN81_RS23565 () | 18370..18864 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| HQN81_RS23570 () | 18920..19522 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| HQN81_RS23575 () | 19876..21222 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| HQN81_RS23580 () | 21501..23381 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| HQN81_RS23585 () | 23399..23746 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| HQN81_RS23590 () | 23865..24213 | + | 349 | Protein_27 | hypothetical protein | - |
| HQN81_RS23595 () | 24233..24823 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| HQN81_RS23600 () | 24823..25080 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| HQN81_RS23605 () | 25431..26432 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| HQN81_RS23610 () | 26608..26952 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| HQN81_RS23615 () | 27451..27705 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| HQN81_RS23620 () | 27750..28676 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| HQN81_RS23625 () | 29208..29621 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| HQN81_RS23630 () | 29623..30402 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| HQN81_RS23635 () | 30582..31226 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HQN81_RS23640 () | 31313..31621 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HQN81_RS23645 () | 32035..33015 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HQN81_RS23650 () | 33008..33424 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HQN81_RS23655 () | 33426..34700 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| HQN81_RS23660 () | 34700..35137 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HQN81_RS23665 () | 35134..35382 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HQN81_RS23670 () | 35800..36702 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| HQN81_RS23675 () | 36699..37010 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| HQN81_RS23680 () | 37087..37770 | + | 684 | WP_000086178.1 | DNA methylase | - |
| HQN81_RS23685 () | 37771..37992 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| HQN81_RS23690 () | 38004..38438 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| HQN81_RS23695 () | 38438..39247 | + | 810 | Protein_48 | hypothetical protein | - |
| HQN81_RS23700 () | 39132..39704 | + | 573 | WP_015059345.1 | YubH family protein | - |
| HQN81_RS23705 () | 39800..40102 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| HQN81_RS23710 () | 40149..40571 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| HQN81_RS23715 () | 40568..40759 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| HQN81_RS23720 () | 41092..41160 | - | 69 | Protein_53 | pilus protein | - |
| HQN81_RS23725 () | 41529..42056 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| HQN81_RS23730 () | 42114..42347 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| HQN81_RS23735 () | 42406..44364 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| HQN81_RS23740 () | 44419..44853 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HQN81_RS23745 () | 44850..45569 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| HQN81_RS23750 () | 45566..46162 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| HQN81_RS23755 () | 46234..46704 | + | 471 | WP_001347396.1 | YubH family protein | - |
| HQN81_RS23760 () | 46625..47125 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| HQN81_RS23765 () | 47854..48288 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| HQN81_RS23770 () | 48380..48646 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HQN81_RS23775 () | 48711..49652 | + | 942 | WP_000038339.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HQN81_RS23780 () | 49714..49884 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| HQN81_RS23785 () | 49915..50166 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HQN81_RS23790 () | 50200..50397 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| HQN81_RS23795 () | 50746..51594 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| HQN81_RS23800 () | 51679..52014 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| HQN81_RS23805 () | 52248..52580 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HQN81_RS23810 () | 52591..55290 | + | 2700 | WP_024143648.1 | IncI1-type relaxase NikB | - |
| HQN81_RS23815 () | 55327..57618 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| HQN81_RS23820 () | 57611..58681 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HQN81_RS23825 () | 58700..59908 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 60088..60145 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60088..60145 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60088..60145 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 60088..60145 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| HQN81_RS23830 () | 60200..60352 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| HQN81_RS23835 () | 60424..60675 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| HQN81_RS23840 () | 61334..61510 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| HQN81_RS23845 () | 61902..62111 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| HQN81_RS23850 () | 62183..62833 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HQN81_RS23855 () | 62907..65075 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| HQN81_RS23860 () | 65172..65756 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| HQN81_RS23865 () | 65785..66987 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| HQN81_RS23870 () | 66954..67568 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| HQN81_RS23875 () | 67568..70612 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| HQN81_RS23880 () | 70702..71502 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HQN81_RS23885 () | 71486..71674 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HQN81_RS23890 () | 71738..72142 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| HQN81_RS23895 () | 72193..72720 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HQN81_RS23900 () | 72720..73424 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HQN81_RS23905 () | 73424..74713 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| HQN81_RS23910 () | 74716..75699 | - | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| HQN81_RS23915 () | 75710..76402 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| HQN81_RS23920 () | 76399..76746 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HQN81_RS23925 () | 76764..80531 | - | 3768 | WP_001141527.1 | DNA primase | - |
| HQN81_RS23930 () | 80620..81171 | - | 552 | WP_000014583.1 | phospholipase D family protein | - |
| HQN81_RS23935 () | 81186..81476 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| HQN81_RS23940 () | 81473..82621 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| HQN81_RS23945 () | 82618..83436 | - | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| HQN81_RS23950 () | 83433..83891 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HQN81_RS23955 () | 84286..84870 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HQN81_RS23960 () | 84930..86132 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| HQN81_RS23965 () | 86217..87041 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| HQN81_RS23970 () | 87192..88346 | - | 1155 | WP_001139957.1 | integrase | - |
| HQN81_RS23975 () | 88885..89217 | + | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| HQN81_RS23980 () | 89264..90139 | - | 876 | WP_013188473.1 | class A extended-spectrum beta-lactamase CTX-M-1 | - |
| HQN81_RS23985 () | 90427..91689 | - | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| HQN81_RS23990 () | 92546..92794 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| HQN81_RS23995 () | 92791..94083 | - | 1293 | WP_001417545.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HQN81_RS24000 () | 94083..94739 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| HQN81_RS24005 () | 94724..95284 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| HQN81_RS24010 () | 95294..95908 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| HQN81_RS24015 () | 95926..97023 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| HQN81_RS24020 () | 97036..98589 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| HQN81_RS24025 () | 98600..99052 | - | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| HQN81_RS24030 () | 99039..100334 | - | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| HQN81_RS24035 () | 100327..102009 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| HQN81_RS24040 () | 102023..102460 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| HQN81_RS24045 () | 102460..103527 | - | 1068 | WP_001302629.1 | type IV pilus biogenesis lipoprotein PilL | - |
| HQN81_RS24050 () | 104151..104447 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| HQN81_RS24055 () | 104623..104877 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HQN81_RS24060 () | 105039..105590 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| HQN81_RS24065 () | 105763..106446 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| HQN81_RS24070 () | 106700..107233 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| HQN81_RS24075 () | 107675..107962 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HQN81_RS24080 () | 107880..108143 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.006 |