MGE detailed information

MGE type: Conjugative plasmid        MGE length: 175089 bp
Accession: NZ_CP051656        Location: 1..175089         Organism: Escherichia coli strain RM11911       Replicon: plasmid pRM11911


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
F7D04_RS26105 () 1..624 + 624 WP_097368726.1 IS21 family transposase IS100kyp Transposase
F7D04_RS26110 () 691..939 - 249 Protein_1 DUF932 domain-containing protein -
F7D04_RS26115 () 1058..1345 - 288 WP_000107542.1 hypothetical protein -
F7D04_RS26120 () 1409..1645 + 237 Protein_3 hypothetical protein -
F7D04_RS26125 () 2259..2420 - 162 WP_000775238.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 2486..2683 - 198 NuclAT_0 - Antitoxin Detail
- () 2486..2683 - 198 NuclAT_0 - Antitoxin Detail
- () 2486..2683 - 198 NuclAT_0 - Antitoxin Detail
- () 2486..2683 - 198 NuclAT_0 - Antitoxin Detail
F7D04_RS26130 () 2695..3414 - 720 Protein_5 plasmid SOS inhibition protein A -
F7D04_RS26135 () 3411..3557 - 147 Protein_6 conjugation system SOS inhibitor PsiB -
F7D04_RS26140 () 3550..3816 + 267 Protein_7 DUF4113 domain-containing protein -
F7D04_RS26145 () 3818..4234 - 417 WP_001278818.1 plasmid partitioning/stability family protein -
F7D04_RS26150 () 4227..5203 - 977 Protein_9 recombinase -
F7D04_RS26155 () 5617..5925 - 309 WP_000030206.1 molecular chaperone GroEL -
F7D04_RS26160 () 6012..6656 - 645 WP_001144036.1 ParA family protein -
F7D04_RS26165 () 6835..7365 - 531 Protein_12 IS91 family transposase ISSod25 Transposase
F7D04_RS26170 () 7413..8192 - 780 WP_050940308.1 hypothetical protein -
F7D04_RS26175 () 9647..10623 + 977 Protein_14 RepB family plasmid replication initiator protein -
F7D04_RS26180 () 10907..11239 - 333 Protein_15 IS91 family transposase ISMno23 Transposase
F7D04_RS26185 () 11322..12019 + 698 Protein_16 IS1 family transposase IS1S Transposase
F7D04_RS26190 () 12092..12514 + 423 WP_001212725.1 Exc2 family lipoprotein -
F7D04_RS26195 () 12775..14862 - 2088 WP_032285071.1 bifunctional siderophore receptor/adhesin Iha -
F7D04_RS26200 () 15170..15349 - 180 Protein_19 IS3 family transposase -
F7D04_RS26205 () 15553..15842 - 290 Protein_20 IS3 family transposase IS3F Transposase
F7D04_RS26210 () 16094..17476 - 1383 WP_172636188.1 Adhesin YadA VF
F7D04_RS26215 () 17730..17819 + 90 Protein_22 transposase -
F7D04_RS26220 () 17886..18340 + 455 Protein_23 transposase -
F7D04_RS26225 () 18390..19260 + 871 Protein_24 IS3 family transposase -
F7D04_RS26230 () 19356..20726 + 1371 Protein_25 ISL3 family transposase ISEc38 Transposase
F7D04_RS26235 () 20959..22494 + 1536 WP_050940639.1 IS21 family transposase ISSso4 Transposase
F7D04_RS26240 () 22511..23266 + 756 Protein_27 IS21 family transposase ISSso4 Transposase
F7D04_RS26245 () 23373..23666 - 294 Protein_28 conjugal transfer protein TraE -
F7D04_RS26250 () 23926..24246 + 321 WP_000695052.1 hypothetical protein -
F7D04_RS26255 () 24338..24628 - 291 WP_032284964.1 hypothetical protein -
F7D04_RS26260 () 25086..26456 - 1371 WP_032285356.1 hypothetical protein VF
F7D04_RS26265 () 26413..26694 - 282 WP_050437790.1 IS66 family insertion sequence element accessory protein TnpB -
F7D04_RS26270 () 26681..26815 - 135 Protein_33 IS66 family insertion sequence element accessory protein TnpB -
F7D04_RS26275 () 26912..27667 - 756 Protein_34 IS21 family transposase ISSso4 Transposase
F7D04_RS26280 () 27684..29219 - 1536 WP_050940639.1 IS21 family transposase ISSso4 Transposase
F7D04_RS26285 () 29451..29525 - 75 Protein_36 IS66 family insertion sequence element accessory protein TnpB -
F7D04_RS26290 () 29613..30635 + 1023 WP_000255944.1 IS21 family transposase IS100kyp Transposase
F7D04_RS26295 () 30635..31414 + 780 WP_001323403.1 IS21 family transposase IS100kyp Transposase
F7D04_RS26300 () 31482..32726 + 1245 Protein_39 type-F conjugative transfer system mating-pair stabilization protein TraN -
F7D04_RS26305 () 32753..33010 + 258 WP_050939798.1 conjugal transfer protein TrbE -
F7D04_RS26310 () 33003..33746 + 744 WP_050939800.1 type-F conjugative transfer system pilin assembly protein TraF -
F7D04_RS26315 () 33871..34152 + 282 WP_000549794.1 type-F conjugative transfer system pilin chaperone TraQ -
F7D04_RS26320 () 34139..34684 + 546 WP_050939804.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
F7D04_RS26325 () 34614..34955 + 342 WP_072095529.1 P-type conjugative transfer protein TrbJ -
F7D04_RS26330 () 34942..35334 + 393 WP_050939810.1 F-type conjugal transfer protein TrbF -
F7D04_RS26335 () 35321..36694 + 1374 WP_050939813.1 conjugal transfer protein TraH -
F7D04_RS26340 () 36691..39516 + 2826 WP_050939816.1 conjugal transfer mating pair stabilization protein TraG -
F7D04_RS26345 () 39513..40022 + 510 Protein_48 conjugal transfer entry exclusion protein TraS -
F7D04_RS26350 () 40036..40767 + 732 WP_000850423.1 complement resistance protein TraT -
F7D04_RS26355 () 41020..43200 + 2181 WP_069903968.1 type IV conjugative transfer system coupling protein TraD -
F7D04_RS26360 () 43209..43607 - 399 WP_000911315.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
F7D04_RS26365 () 43607..43834 - 228 WP_000450532.1 toxin-antitoxin system antitoxin VapB -
F7D04_RS26370 () 43916..49186 + 5271 WP_050939819.1 Multifunctional conjugation protein TraI Relaxase
F7D04_RS26375 () 49206..49946 + 741 WP_050939821.1 conjugal transfer pilus acetylase TraX -
F7D04_RS26380 () 50005..50865 + 861 WP_000868986.1 putative protein YcjY VF
F7D04_RS26385 () 50968..51525 + 558 WP_000139319.1 fertility inhibition protein FinO -
F7D04_RS26390 () 51680..51883 + 204 WP_001327131.1 hypothetical protein -
F7D04_RS26395 () 52628..53089 + 462 WP_000760078.1 thermonuclease family protein -
F7D04_RS26400 () 53192..53575 + 384 WP_001109066.1 hypothetical protein -
- () 53750..53811 - 62 NuclAT_1 - -
- () 53750..53811 - 62 NuclAT_1 - -
- () 53750..53811 - 62 NuclAT_1 - -
- () 53750..53811 - 62 NuclAT_1 - -
F7D04_RS26405 () 53798..54004 + 207 WP_047649939.1 type I toxin-antitoxin system Hok family toxin -
F7D04_RS26410 () 54285..54533 + 249 WP_000083838.1 replication regulatory protein RepA -
F7D04_RS26415 () 54780..54854 + 75 WP_001365705.1 RepA leader peptide Tap -
F7D04_RS26420 () 54847..55704 + 858 WP_000131011.1 incFII family plasmid replication initiator RepA -
F7D04_RS26425 () 56619..56795 + 177 WP_157905840.1 hypothetical protein -
F7D04_RS26430 () 56828..57724 - 897 Protein_65 IS3 family transposase ISKpn38 Transposase
F7D04_RS26435 () 57794..58798 + 1005 WP_050939068.1 IS110 family transposase ISSfl8 Transposase
F7D04_RS26440 () 59049..59714 - 666 WP_072095473.1 IS3 family transposase ISKpn38 Transposase
F7D04_RS26445 () 59749..59907 + 159 WP_077793267.1 toxin-antitoxin system protein -
F7D04_RS26450 () 59904..60181 + 278 Protein_69 type II toxin-antitoxin system RelE/ParE family toxin -
F7D04_RS26455 () 60227..60694 + 468 WP_050939063.1 DNA polymerase III subunit epsilon -
F7D04_RS26460 () 61019..61477 + 459 WP_050939085.1 hypothetical protein -
F7D04_RS26465 () 62070..62351 + 282 WP_050939060.1 ribbon-helix-helix protein, CopG family -
F7D04_RS26470 () 62351..62626 + 276 WP_050939058.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
F7D04_RS26475 () 62732..63013 + 282 WP_050939055.1 hypothetical protein -
F7D04_RS26480 () 63250..63501 - 252 WP_050939053.1 hypothetical protein -
F7D04_RS26485 () 64108..65260 - 1153 Protein_76 IS3 family transposase -
F7D04_RS26490 () 65319..65561 + 243 Protein_77 transposase -
F7D04_RS26495 () 66826..67344 + 519 WP_050939047.1 Hemolysin-activating lysine-acyltransferase HlyC VF
F7D04_RS26500 () 67345..70419 + 3075 WP_050939044.1 Hemolysin, chromosomal VF
F7D04_RS26505 () 70490..72613 + 2124 WP_050939042.1 Alpha-hemolysin translocation ATP-binding protein HlyB VF
F7D04_RS26510 () 72632..74068 + 1437 WP_050939040.1 Hemolysin secretion protein D, chromosomal VF
F7D04_RS26515 () 74674..75381 + 708 Protein_82 IS3 family transposase IS911 Transposase
F7D04_RS26520 () 76057..76412 + 356 Protein_83 reverse transcriptase -
F7D04_RS26525 () 76384..77085 + 702 WP_169072621.1 reverse transcriptase/maturase family protein -
F7D04_RS26530 () 77058..77443 + 386 Protein_85 maturase -
F7D04_RS26535 () 77524..77985 + 462 Protein_86 IS3 family transposase -
F7D04_RS26540 () 78112..81156 + 3045 WP_050939030.1 Dermonecrotic toxin VF
F7D04_RS26545 () 81441..82094 + 654 Protein_88 IS21 family transposase IS21 Transposase
F7D04_RS26550 () 83099..83875 + 777 WP_072095470.1 Cytolethal distending toxin subunit A VF
F7D04_RS26555 () 83872..84681 + 810 WP_000759934.1 Cytolethal distending toxin subunit B VF
F7D04_RS26560 () 84696..85241 + 546 WP_050939027.1 hypothetical protein VF
F7D04_RS26565 () 85357..85521 + 165 Protein_92 IS110 family transposase -
F7D04_RS26570 () 86213..86320 - 108 Protein_93 IS630 family transposase -
F7D04_RS26575 () 86460..87058 + 599 Protein_94 Cyclic di-GMP phosphodiesterase PdeL VF
F7D04_RS26580 () 87144..88340 + 1197 WP_050939024.1 hypothetical protein -
F7D04_RS26585 () 88480..89041 + 562 Protein_96 hypothetical protein VF
F7D04_RS26590 () 89241..89985 + 745 Protein_97 omptin family outer membrane protease -
F7D04_RS26595 () 90129..91238 + 1110 WP_050939019.1 SDR family oxidoreductase -
F7D04_RS26600 () 91310..92212 + 903 WP_050939074.1 hypothetical protein VF
F7D04_RS26605 () 92418..95379 - 2962 Protein_100 Tn3 family transposase TnpA_ISPa38 Transposase
F7D04_RS26610 () 95599..96159 + 561 WP_021573890.1 Tn3 family transposase ISPsy42 Transposase
F7D04_RS26615 () 96488..97435 - 948 WP_001253824.1 DMT family transporter -
F7D04_RS26625 () 98237..99251 - 1015 Protein_103 transposase -
F7D04_RS26630 () 99652..100683 + 1032 Protein_104 IS3 family transposase -
F7D04_RS26635 () 100986..101833 + 848 Protein_105 Transposon Tn10 TetD protein VF
F7D04_RS26640 () 102691..102960 - 270 WP_000976359.1 hypothetical protein -
F7D04_RS26645 () 103268..104296 - 1029 Protein_107 putative autotransporter VF
F7D04_RS26650 () 104884..108042 - 3159 WP_172636469.1 putative autotransporter VF
F7D04_RS26655 () 108035..109255 - 1221 WP_000040077.1 autotransporter strand-loop-strand O-heptosyltransferase -
F7D04_RS26660 () 109773..111311 - 1539 WP_050939008.1 IS66 family transposase ISEc8 Transposase
F7D04_RS26665 () 111361..111708 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
F7D04_RS26670 () 111705..112085 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
F7D04_RS26675 () 113105..114052 + 948 WP_040072486.1 Outer membrane protease OmpP VF
F7D04_RS26680 () 114157..115644 + 1488 WP_072095474.1 alpha/beta hydrolase -
F7D04_RS26685 () 116395..117135 + 741 WP_135259140.1 tyrosine-type recombinase/integrase -
F7D04_RS26690 () 117420..118397 - 978 WP_000361618.1 RepB family plasmid replication initiator protein -
F7D04_RS26695 () 119141..119838 + 698 Protein_117 IS1 family transposase IS1S Transposase
F7D04_RS26700 () 119874..120200 + 327 WP_135259203.1 hypothetical protein -
F7D04_RS26705 () 120214..121236 + 1023 WP_000255944.1 IS21 family transposase IS100kyp Transposase
F7D04_RS26710 () 121236..122015 + 780 WP_001323403.1 IS21 family transposase IS100kyp Transposase
F7D04_RS26715 () 122083..122214 - 132 Protein_121 IS66 family transposase ISEc49 Transposase
F7D04_RS26720 () 122638..123150 - 513 WP_032285357.1 hypothetical protein VF
F7D04_RS26725 () 123686..124105 - 420 WP_032285358.1 Protein AfaD VF
F7D04_RS26730 () 124121..126631 - 2511 WP_032285371.1 F1 capsule-anchoring protein VF
F7D04_RS26735 () 126878..127645 - 768 WP_032285359.1 Chaperone protein caf1M VF
F7D04_RS26740 () 127723..128067 - 345 WP_001323645.1 Major pilu subunit operon regulatory protein PapB VF
F7D04_RS26745 () 128610..128798 + 189 WP_032285360.1 FaeA/PapI family transcriptional regulator -
F7D04_RS26750 () 128893..130530 - 1638 Protein_128 IS66 family transposase ISEc47 Transposase
F7D04_RS26755 () 130561..130911 - 351 WP_000624722.1 IS66 family transposase ISEc23 Transposase
F7D04_RS26760 () 130908..131333 - 426 WP_032285361.1 IS66 family transposase ISEc23 Transposase
F7D04_RS26765 () 131417..131590 + 174 Protein_131 IS3 family transposase -
F7D04_RS26770 () 131618..131881 - 264 WP_050940111.1 hypothetical protein -
F7D04_RS26775 () 132019..132228 + 210 WP_050561356.1 hypothetical protein -
F7D04_RS26780 () 132391..136290 - 3900 WP_050940109.1 Serine protease EspP VF
F7D04_RS26785 () 136670..137171 - 502 Protein_135 thermonuclease family protein -
F7D04_RS26790 () 137368..137669 + 302 Protein_136 IS3 family transposase ISEc31 Transposase
F7D04_RS26795 () 137682..138834 - 1153 Protein_137 IS30-like element IS30 family transposase -
F7D04_RS26800 () 138899..139323 + 425 Protein_138 IS3 family transposase -
F7D04_RS26805 () 139996..141504 + 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
F7D04_RS26810 () 141585..142073 + 489 Protein_140 IS3 family transposase ISEc31 Transposase
F7D04_RS26815 () 142237..142473 - 237 Protein_141 DUF1380 family protein -
F7D04_RS26820 () 142487..142708 - 222 WP_001104898.1 hypothetical protein -
F7D04_RS26825 () 142709..143392 - 684 WP_000086174.1 DNA methylase -
F7D04_RS26830 () 143480..143593 + 114 Protein_144 DinI-like family protein -
F7D04_RS26835 () 143590..144027 + 438 WP_172636184.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
F7D04_RS26840 () 144027..145301 + 1275 WP_085004465.1 translesion error-prone DNA polymerase V subunit UmuC -
F7D04_RS26845 () 145303..145719 - 417 WP_001278818.1 plasmid partitioning/stability family protein -
F7D04_RS26850 () 145712..146692 - 981 WP_077166745.1 plasmid segregation protein ParM -
F7D04_RS26855 () 147106..147414 - 309 WP_000030199.1 hypothetical protein -
F7D04_RS26860 () 147501..148145 - 645 WP_001144036.1 ParA family protein -
F7D04_RS26865 () 148324..149130 - 807 WP_063121642.1 site-specific integrase -
F7D04_RS26870 () 149131..149436 - 306 WP_032285172.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
F7D04_RS26875 () 149438..149656 - 219 WP_000813639.1 type II toxin-antitoxin system antitoxin CcdA -
F7D04_RS26880 () 150505..151743 + 1239 WP_050940296.1 3-oxo-glucose-6-phosphate:glutamate aminotransferase VF
F7D04_RS26885 () 151727..152554 + 828 WP_172636186.1 HAD-IIB family hydrolase -
F7D04_RS26890 () 152557..153573 + 1017 WP_032280058.1 Gfo/Idh/MocA family oxidoreductase -
F7D04_RS26895 () 153575..153844 + 270 WP_000379710.1 SemiSWEET transporter -
F7D04_RS26900 () 153841..155373 + 1533 WP_135259177.1 NAD(P)-binding domain-containing protein -
F7D04_RS26905 () 155405..155857 - 453 WP_001825139.1 N-acetyltransferase -
F7D04_RS26910 () 156184..156441 + 258 WP_000371887.1 hypothetical protein -
F7D04_RS26915 () 156441..157031 + 591 WP_032285175.1 hypothetical protein -
F7D04_RS26920 () 157214..157993 - 780 WP_001323403.1 IS21 family transposase IS100kyp Transposase
F7D04_RS26925 () 157993..159015 - 1023 WP_000255944.1 IS21 family transposase IS100kyp Transposase
F7D04_RS26930 () 159101..159670 - 570 Protein_164 conjugal transfer protein TraN -
F7D04_RS26935 () 159667..160305 - 639 WP_000777695.1 type-F conjugative transfer system pilin assembly protein TrbC -
F7D04_RS26940 () 160314..161306 - 993 WP_050940392.1 conjugal transfer pilus assembly protein TraU -
F7D04_RS26945 () 161303..161935 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
F7D04_RS26950 () 161932..162318 - 387 WP_050940390.1 type-F conjugative transfer system protein TrbI -
F7D04_RS26955 () 162315..164942 - 2628 WP_001064245.1 type IV secretion system protein TraC -
F7D04_RS26960 () 165102..165323 - 222 WP_001278689.1 conjugal transfer protein TraR -
F7D04_RS26965 () 165458..165973 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
F7D04_RS26970 () 165970..166221 - 252 WP_050940388.1 conjugal transfer protein TrbG -
F7D04_RS26975 () 166233..166463 - 231 WP_001352845.1 conjugal transfer protein TrbD -
F7D04_RS26980 () 166417..167007 - 591 WP_050940386.1 conjugal transfer protein TraP -
F7D04_RS26985 () 166997..168424 - 1428 WP_050940383.1 conjugal transfer protein TraB -
F7D04_RS26990 () 168424..169128 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
F7D04_RS26995 () 169139..169705 - 567 WP_050940381.1 type IV conjugative transfer system protein TraE -
F7D04_RS27000 () 169727..170038 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
F7D04_RS27005 () 170053..170412 - 360 WP_000340272.1 type IV conjugative transfer system pilin TraA -
F7D04_RS27010 () 170446..170673 - 228 WP_050940379.1 conjugal transfer relaxosome protein TraY -
F7D04_RS27015 () 170767..171453 - 687 WP_050940377.1 PAS domain-containing protein -
F7D04_RS27020 () 171644..172027 - 384 WP_050940374.1 relaxosome protein TraM -
F7D04_RS27025 () 172361..172951 + 591 WP_169072903.1 hypothetical protein VF
F7D04_RS27030 () 173247..173825 - 579 Protein_184 DUF945 domain-containing protein -
F7D04_RS27035 () 173912..174934 + 1023 WP_000255944.1 IS21 family transposase IS100kyp Transposase
F7D04_RS27040 () 174931..175089 + 159 Protein_186 transposase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance