MGE detailed information
MGE type: Prophage MGE length: 51832 bp
Accession: NZ_CP050691 Location: 2547816..2599647 Organism: Staphylococcus aureus strain PMB196-1 Replicon: chromosome
Accession: NZ_CP050691 Location: 2547816..2599647 Organism: Staphylococcus aureus strain PMB196-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HCU71_RS12380 () | 2544321..2544611 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
HCU71_RS12385 () | 2544622..2546055 | - | 1434 | WP_001558588.1 | extracellular adherence protein Eap/Map | - |
HCU71_RS12390 () | 2546441..2546691 | + | 251 | Protein_2393 | sphingomyelin phosphodiesterase | - |
HCU71_RS12395 () | 2547013..2547192 | + | 180 | WP_000669789.1 | hypothetical protein | - |
HCU71_RS12400 () | 2547503..2547763 | + | 261 | WP_001791826.1 | hypothetical protein | - |
HCU71_RS12405 () | 2547816..2548166 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
HCU71_RS12410 () | 2548852..2549301 | + | 450 | WP_000727649.1 | Chemotaxis inhibitory protein | VF |
HCU71_RS12415 () | 2549396..2549731 | - | 336 | Protein_2398 | SH3 domain-containing protein | - |
HCU71_RS12420 () | 2550381..2550872 | - | 492 | WP_000919350.1 | Staphylokinase | VF |
HCU71_RS12425 () | 2551063..2551818 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
HCU71_RS12430 () | 2551830..2552084 | - | 255 | WP_000611512.1 | phage holin | - |
HCU71_RS12435 () | 2552136..2552243 | + | 108 | WP_001791821.1 | hypothetical protein | - |
- () | 2552165..2552304 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
- () | 2552165..2552304 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
- () | 2552165..2552304 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
- () | 2552165..2552304 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
HCU71_RS12440 () | 2552296..2552472 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
HCU71_RS12445 () | 2552581..2553354 | - | 774 | WP_000750406.1 | Enterotoxin type A | VF |
HCU71_RS12450 () | 2553775..2554149 | - | 375 | WP_000340977.1 | hypothetical protein | - |
HCU71_RS12455 () | 2554205..2554492 | - | 288 | WP_001040259.1 | hypothetical protein | - |
HCU71_RS12460 () | 2554539..2554691 | - | 153 | WP_001153681.1 | hypothetical protein | - |
HCU71_RS12465 () | 2554681..2558466 | - | 3786 | WP_000582190.1 | hypothetical protein | - |
HCU71_RS12470 () | 2558482..2559966 | - | 1485 | WP_000567413.1 | phage tail family protein | - |
HCU71_RS12475 () | 2559963..2564492 | - | 4530 | WP_001643732.1 | phage tail tape measure protein | - |
HCU71_RS12480 () | 2564737..2565087 | - | 351 | WP_001096355.1 | hypothetical protein | - |
HCU71_RS12485 () | 2565137..2565361 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
HCU71_RS12490 () | 2565403..2566047 | - | 645 | WP_000268735.1 | phage tail protein | - |
HCU71_RS12495 () | 2566048..2566455 | - | 408 | WP_000565498.1 | hypothetical protein | - |
HCU71_RS12500 () | 2566452..2566856 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
HCU71_RS12505 () | 2566853..2567215 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
HCU71_RS12510 () | 2567199..2567483 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
HCU71_RS12515 () | 2567473..2567757 | - | 285 | WP_000238236.1 | hypothetical protein | - |
HCU71_RS12520 () | 2567777..2568922 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
HCU71_RS12525 () | 2568946..2569683 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
HCU71_RS12530 () | 2569667..2570854 | - | 1188 | WP_000025274.1 | phage portal protein | - |
HCU71_RS12535 () | 2570870..2572531 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
HCU71_RS12540 () | 2572528..2572872 | - | 345 | WP_000402904.1 | hypothetical protein | - |
HCU71_RS12545 () | 2572929..2573300 | - | 372 | WP_167780480.1 | HNH endonuclease | - |
HCU71_RS12550 () | 2573532..2573948 | - | 417 | WP_000590122.1 | hypothetical protein | - |
HCU71_RS12555 () | 2573976..2574176 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
HCU71_RS12560 () | 2574176..2574325 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
HCU71_RS12565 () | 2574322..2574708 | - | 387 | WP_000592207.1 | hypothetical protein | - |
HCU71_RS12570 () | 2574705..2574911 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
HCU71_RS12575 () | 2574948..2575490 | - | 543 | WP_000185659.1 | dUTP pyrophosphatase | - |
HCU71_RS12580 () | 2575483..2575665 | - | 183 | WP_000028422.1 | hypothetical protein | Antitoxin Detail |
HCU71_RS12585 () | 2575655..2575906 | - | 252 | WP_001065091.1 | DUF1024 family protein | Toxin Detail |
HCU71_RS12590 () | 2575899..2576066 | - | 168 | WP_001624242.1 | hypothetical protein | - |
HCU71_RS12595 () | 2576078..2576320 | - | 243 | WP_000131366.1 | hypothetical protein | - |
HCU71_RS12600 () | 2576324..2576692 | - | 369 | WP_000101274.1 | hypothetical protein | - |
HCU71_RS12605 () | 2576705..2577014 | - | 310 | Protein_2436 | RusA family crossover junction endodeoxyribonuclease | - |
HCU71_RS12610 () | 2577023..2577241 | - | 219 | WP_000338531.1 | hypothetical protein | - |
HCU71_RS12615 () | 2577248..2578132 | - | 885 | WP_000148316.1 | DnaD domain protein | - |
HCU71_RS12620 () | 2578162..2578632 | - | 471 | WP_000934764.1 | single-stranded DNA-binding protein | - |
HCU71_RS12625 () | 2578633..2579250 | - | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
HCU71_RS12630 () | 2579331..2580251 | - | 921 | WP_000138472.1 | recombinase RecT | - |
HCU71_RS12635 () | 2580253..2582196 | - | 1944 | WP_000700577.1 | AAA family ATPase | - |
HCU71_RS12640 () | 2582205..2582468 | - | 264 | WP_001205732.1 | hypothetical protein | - |
HCU71_RS12645 () | 2582477..2582737 | - | 261 | WP_000291503.1 | DUF1108 family protein | - |
HCU71_RS12650 () | 2582718..2583044 | - | 327 | WP_000165375.1 | DUF2482 family protein | - |
HCU71_RS12655 () | 2583139..2583300 | - | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
HCU71_RS12660 () | 2583297..2583617 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
HCU71_RS12665 () | 2583676..2584308 | + | 633 | WP_000275058.1 | hypothetical protein | - |
HCU71_RS12670 () | 2584323..2584463 | - | 141 | WP_000939496.1 | hypothetical protein | - |
HCU71_RS12675 () | 2584494..2584691 | - | 198 | WP_001148855.1 | hypothetical protein | - |
HCU71_RS12680 () | 2584707..2585459 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
HCU71_RS12685 () | 2585510..2585839 | + | 330 | WP_000128907.1 | hypothetical protein | - |
HCU71_RS12690 () | 2585828..2586043 | - | 216 | WP_167780481.1 | DUF2829 domain-containing protein | - |
HCU71_RS12695 () | 2586059..2586322 | - | 264 | WP_167780482.1 | helix-turn-helix domain-containing protein | - |
HCU71_RS12700 () | 2586319..2586492 | - | 174 | WP_001801500.1 | hypothetical protein | - |
HCU71_RS12705 () | 2586455..2587168 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
HCU71_RS12710 () | 2587184..2588116 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
HCU71_RS12715 () | 2588122..2588463 | + | 342 | WP_000591749.1 | hypothetical protein | - |
HCU71_RS12720 () | 2588667..2588849 | + | 183 | WP_000705248.1 | hypothetical protein | - |
HCU71_RS12725 () | 2588949..2589413 | + | 465 | WP_000825947.1 | hypothetical protein | - |
HCU71_RS12730 () | 2589472..2590509 | + | 1038 | WP_167780483.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
HCU71_RS12735 () | 2590560..2591390 | + | 831 | Protein_2462 | Phospholipase C | VF |
HCU71_RS12740 () | 2591628..2592644 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
HCU71_RS12745 () | 2592666..2593721 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
HCU71_RS12750 () | 2594157..2595380 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
HCU71_RS12755 () | 2595824..2597131 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
HCU71_RS12760 () | 2597671..2599287 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
HCU71_RS12765 () | 2599363..2599647 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
HCU71_RS12770 () | 2599822..2600565 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
HCU71_RS12775 () | 2600590..2601816 | - | 1227 | WP_167780484.1 | hypothetical protein | - |
HCU71_RS12780 () | 2602013..2602639 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
HCU71_RS12785 () | 2603000..2603785 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
HCU71_RS12790 () | 2604385..2604519 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|---|---|---|---|---|---|
Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA22266, TA22270 | NC_009641 | 2089433..2146383 | 0.005 |