MGE detailed information
MGE type: Genomic_island MGE length: 31882 bp
Accession: NZ_CP049112 Location: 1099311..1131192 Organism: Escherichia coli strain WF5-5-T2 Replicon: chromosome
Accession: NZ_CP049112 Location: 1099311..1131192 Organism: Escherichia coli strain WF5-5-T2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6R06_RS05330 (1095495) | 1095495..1096763 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| G6R06_RS05335 (1096783) | 1096783..1097760 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| G6R06_RS05340 (1098096) | 1098096..1100348 | - | 2253 | Protein_1042 | alpha-amylase family glycosyl hydrolase | - |
| G6R06_RS05350 (1101734) | 1101734..1103107 | + | 1374 | Protein_1043 | DUF5507 domain-containing protein | - |
| G6R06_RS05355 (1103501) | 1103501..1103680 | + | 180 | WP_087676347.1 | DNA invertase | - |
| G6R06_RS05360 (1103835) | 1103835..1103954 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| G6R06_RS05365 (1104019) | 1104019..1108599 | + | 4581 | WP_010723187.1 | Bifunctional oligoribonuclease and PAP phosphatase NrnA | VF |
| G6R06_RS05370 (1108963) | 1108963..1109292 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| G6R06_RS05375 (1109313) | 1109313..1109630 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| G6R06_RS05380 (1109668) | 1109668..1109868 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| G6R06_RS05385 (1109877) | 1109877..1110359 | - | 483 | WP_001407480.1 | RadC family protein | - |
| G6R06_RS05390 (1110368) | 1110368..1110826 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| G6R06_RS05395 (1110839) | 1110839..1110961 | + | 123 | WP_001407482.1 | hypothetical protein | - |
| G6R06_RS05400 (1110929) | 1110929..1111113 | - | 185 | Protein_1053 | DUF905 family protein | - |
| G6R06_RS05405 (1111724) | 1111724..1113427 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| G6R06_RS05410 (1113569) | 1113569..1114578 | + | 1010 | Protein_1055 | arsenic transporter | - |
| G6R06_RS05415 (1114591) | 1114591..1114743 | + | 153 | Protein_1056 | arsenate reductase | - |
| G6R06_RS05420 (1115130) | 1115130..1115597 | - | 468 | WP_000702495.1 | protein YfjT | - |
| G6R06_RS05425 (1115621) | 1115621..1116064 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| G6R06_RS05430 (1116064) | 1116064..1116300 | - | 237 | WP_001144029.1 | protein YpjK | - |
| G6R06_RS05435 (1116341) | 1116341..1117042 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| G6R06_RS05440 (1117259) | 1117259..1118080 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| G6R06_RS05445 (1118172) | 1118172..1119035 | - | 864 | WP_103119217.1 | GTPase family protein | - |
| G6R06_RS05450 (1119391) | 1119391..1119762 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| G6R06_RS05455 (1119755) | 1119755..1120828 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| G6R06_RS05460 (1120970) | 1120970..1121233 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| G6R06_RS05465 (1121593) | 1121593..1123209 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| G6R06_RS05470 (1123206) | 1123206..1125395 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| G6R06_RS05475 (1125573) | 1125573..1126199 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| G6R06_RS05480 (1126352) | 1126352..1127761 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| G6R06_RS05485 (1127890) | 1127890..1128102 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| G6R06_RS05490 (1128146) | 1128146..1129102 | + | 957 | WP_000510827.1 | protein YfjH | - |
| G6R06_RS05495 (1129346) | 1129346..1130587 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| G6R06_RS05505 (1131368) | 1131368..1131850 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| G6R06_RS05510 (1132021) | 1132021..1132458 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| G6R06_RS05515 (1132448) | 1132448..1132738 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| G6R06_RS05520 (1132800) | 1132800..1133141 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| G6R06_RS05525 (1133290) | 1133290..1134951 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| G6R06_RS05530 (1135037) | 1135037..1135915 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |