MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 32102 bp
Accession: NZ_CP048333 Location: 1..32102 Organism: Escherichia coli strain 10 Replicon: plasmid p010_C
Accession: NZ_CP048333 Location: 1..32102 Organism: Escherichia coli strain 10 Replicon: plasmid p010_C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS13_RS24840 () | 1014..1880 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| GZS13_RS24845 () | 1893..2297 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| GZS13_RS24850 () | 2432..2959 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| GZS13_RS24855 () | 3543..3794 | - | 252 | WP_000928750.1 | hypothetical protein | - |
| GZS13_RS24860 () | 3830..4132 | - | 303 | WP_001096507.1 | hypothetical protein | - |
| GZS13_RS24865 () | 4226..4885 | - | 660 | WP_000516222.1 | hypothetical protein | VF |
| GZS13_RS24870 () | 4990..5814 | - | 825 | WP_001353741.1 | Tyrosine recombinase XerD | VF |
| GZS13_RS24875 () | 6377..6688 | - | 312 | WP_023157208.1 | hypothetical protein | - |
| GZS13_RS24880 () | 6708..7364 | - | 657 | WP_000972912.1 | hypothetical protein | - |
| GZS13_RS24885 () | 7468..7932 | - | 465 | WP_001293141.1 | H-NS histone family protein | - |
| GZS13_RS24890 () | 7948..8154 | - | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| GZS13_RS24895 () | 8151..10304 | - | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| GZS13_RS24900 () | 10309..10884 | - | 576 | WP_001199074.1 | hypothetical protein | - |
| GZS13_RS24905 () | 10990..11394 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| GZS13_RS24910 () | 11410..11904 | - | 495 | WP_001215680.1 | thermonuclease family protein | - |
| GZS13_RS24915 () | 11901..12209 | - | 309 | WP_000647576.1 | hypothetical protein | - |
| GZS13_RS24920 () | 12312..12566 | - | 255 | WP_000415096.1 | hypothetical protein | - |
| GZS13_RS24925 () | 12572..12877 | - | 306 | WP_000147044.1 | IncN plasmid KikA protein | - |
| GZS13_RS24930 () | 12861..13280 | - | 420 | WP_000737411.1 | hypothetical protein | - |
| GZS13_RS24935 () | 13292..15154 | - | 1863 | WP_000847106.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GZS13_RS24940 () | 15141..16169 | - | 1029 | WP_000017225.1 | Type IV secretion system protein VirB11 | VF |
| GZS13_RS24945 () | 16171..17289 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| GZS13_RS24950 () | 17282..18190 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| GZS13_RS24955 () | 18187..18873 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| GZS13_RS24960 () | 19388..20482 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| GZS13_RS24965 () | 20494..21210 | - | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| GZS13_RS24970 () | 21222..23969 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| GZS13_RS24975 () | 23988..24260 | - | 273 | WP_001328551.1 | Type IV secretion system protein virB2 | VF |
| GZS13_RS24980 () | 24328..24948 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| GZS13_RS24985 () | 25307..25522 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| GZS13_RS24990 () | 25519..25812 | - | 294 | WP_000134733.1 | LuxR family transcriptional regulator | - |
| GZS13_RS24995 () | 25889..27118 | - | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| GZS13_RS25000 () | 27122..27625 | - | 504 | WP_000781813.1 | hypothetical protein | - |
| GZS13_RS25005 () | 27986..28333 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GZS13_RS25010 () | 28330..28578 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GZS13_RS25015 () | 28883..29233 | - | 351 | WP_000854259.1 | hypothetical protein | - |
| GZS13_RS25020 () | 29324..29623 | - | 300 | WP_000650309.1 | hypothetical protein | - |
| GZS13_RS25025 () | 30077..30304 | - | 228 | WP_000801440.1 | hypothetical protein | - |
| GZS13_RS25030 () | 30291..30542 | - | 252 | WP_001230707.1 | hypothetical protein | - |
| GZS13_RS25035 () | 30539..31081 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| GZS13_RS25040 () | 31186..31701 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain JIE143 transconjugant Tx143 | Non-Mobilizable plasmid | TA10150, TA10151, TA20092 | JN194214 | 1..34345 | 0.004 |