MGE detailed information
MGE type: Conjugative plasmid MGE length: 129675 bp
Accession: NZ_CP048331 Location: 1..129675 Organism: Escherichia coli strain 10 Replicon: plasmid p010_A
Accession: NZ_CP048331 Location: 1..129675 Organism: Escherichia coli strain 10 Replicon: plasmid p010_A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS13_RS23735 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| GZS13_RS23740 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| GZS13_RS23745 () | 2124..2306 | - | 183 | WP_042344623.1 | hypothetical protein | - |
| GZS13_RS23750 () | 2649..2956 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| GZS13_RS23755 () | 3449..4618 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| GZS13_RS23760 () | 4651..4779 | + | 129 | Protein_5 | IS481 family transposase | - |
| GZS13_RS23765 () | 4814..5107 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| GZS13_RS23770 () | 5213..5488 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GZS13_RS23775 () | 5488..5772 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| GZS13_RS23780 () | 6377..7129 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| GZS13_RS23785 () | 7175..8140 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| GZS13_RS23790 () | 8173..8553 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| GZS13_RS23795 () | 8578..9468 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| GZS13_RS23800 () | 9701..9895 | - | 195 | WP_000796505.1 | hypothetical protein | - |
| GZS13_RS23805 () | 9869..10309 | + | 441 | Protein_14 | zinc-binding dehydrogenase | - |
| GZS13_RS23810 () | 10440..11318 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| GZS13_RS23815 () | 11308..12195 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| GZS13_RS23820 () | 12206..13030 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| GZS13_RS23825 () | 13036..14109 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| GZS13_RS23830 () | 14102..15412 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| GZS13_RS23835 () | 15471..15779 | - | 309 | Protein_20 | IS4 family transposase ISEc13 | Transposase |
| GZS13_RS23840 () | 15856..16089 | - | 234 | Protein_21 | Tn3 family transposase ISPsy39 | Transposase |
| GZS13_RS23845 () | 16111..17307 | - | 1197 | Protein_22 | IS3 family transposase | - |
| GZS13_RS23850 () | 17332..18036 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GZS13_RS23855 () | 18094..18624 | - | 531 | Protein_24 | histidine-type phosphatase | - |
| GZS13_RS23860 () | 18746..19231 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| GZS13_RS23865 () | 19256..19741 | - | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| GZS13_RS23870 () | 19728..20423 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| GZS13_RS23875 () | 20428..21558 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| GZS13_RS23880 () | 21548..22831 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| GZS13_RS23885 () | 22834..24213 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| GZS13_RS23890 () | 24317..24844 | - | 528 | WP_000178050.1 | iron transporter | - |
| GZS13_RS23895 () | 24885..26771 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| GZS13_RS23900 () | 27118..27933 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| GZS13_RS23905 () | 28159..28563 | + | 405 | Protein_34 | IS6 family transposase IS15DI | Transposase |
| GZS13_RS23910 () | 28755..29828 | - | 1074 | Protein_35 | Methyl-accepting chemotaxis protein McpQ | VF |
| GZS13_RS23915 () | 29892..30596 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GZS13_RS25300 () | 30637..30816 | - | 180 | Protein_37 | recombinase family protein | - |
| GZS13_RS23925 () | 30942..31292 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| GZS13_RS23930 () | 31495..32508 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| GZS13_RS23935 () | 32666..33139 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| GZS13_RS23940 () | 33270..34058 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GZS13_RS23945 () | 34264..34611 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| GZS13_RS23950 () | 34605..35444 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| GZS13_RS23955 () | 35572..35775 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| GZS13_RS23960 () | 35931..37136 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| GZS13_RS23965 () | 37147..37452 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| GZS13_RS23970 () | 37496..37561 | + | 66 | Protein_47 | EAL domain-containing protein | - |
| GZS13_RS23975 () | 37679..38443 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| GZS13_RS23980 () | 38936..39520 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| GZS13_RS23985 () | 39520..40758 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| GZS13_RS23990 () | 40755..41660 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| GZS13_RS23995 () | 41782..42486 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GZS13_RS24000 () | 42857..43318 | + | 462 | WP_000978817.1 | thermonuclease family protein | - |
| GZS13_RS24005 () | 43611..44939 | - | 1329 | WP_100134641.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| GZS13_RS24010 () | 44990..45694 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GZS13_RS24015 () | 45737..46213 | - | 477 | Protein_56 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GZS13_RS24020 () | 46377..46934 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| GZS13_RS24025 () | 47117..47977 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| GZS13_RS24030 () | 49003..49860 | - | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| GZS13_RS24035 () | 49853..49927 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| GZS13_RS24040 () | 50152..50412 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| GZS13_RS24045 () | 50652..51242 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| GZS13_RS24050 () | 51280..51489 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| GZS13_RS24055 () | 51535..51996 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| GZS13_RS24060 () | 52241..52453 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| GZS13_RS24065 () | 52582..53142 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| GZS13_RS24070 () | 53245..54105 | - | 861 | WP_000704528.1 | putative protein YcjY | VF |
| GZS13_RS24075 () | 54164..54910 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| GZS13_RS24080 () | 54930..60200 | - | 5271 | WP_000986934.1 | Multifunctional conjugation protein TraI | Relaxase |
| GZS13_RS24085 () | 60200..62407 | - | 2208 | WP_001462104.1 | type IV conjugative transfer system coupling protein TraD | - |
| GZS13_RS24090 () | 62660..63391 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| GZS13_RS24095 () | 63423..63920 | - | 498 | WP_000605861.1 | hypothetical protein | - |
| GZS13_RS24100 () | 63939..66758 | - | 2820 | WP_001007057.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GZS13_RS24105 () | 66755..68128 | - | 1374 | WP_001137364.1 | conjugal transfer protein TraH | - |
| GZS13_RS24110 () | 68115..68540 | - | 426 | WP_001448114.1 | F-type conjugal transfer protein TrbF | - |
| GZS13_RS24115 () | 68488..68829 | - | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| GZS13_RS24120 () | 68759..69304 | - | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GZS13_RS24125 () | 69291..69575 | - | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GZS13_RS24130 () | 69702..70040 | - | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| GZS13_RS24135 () | 70056..70799 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GZS13_RS24140 () | 70792..71049 | - | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| GZS13_RS24145 () | 71076..72884 | - | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GZS13_RS24150 () | 72881..73519 | - | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GZS13_RS24155 () | 73528..73833 | - | 306 | WP_000224411.1 | hypothetical protein | - |
| GZS13_RS24160 () | 73863..74855 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| GZS13_RS24165 () | 74852..75484 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| GZS13_RS24170 () | 75481..75867 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| GZS13_RS24175 () | 75864..78491 | - | 2628 | WP_001064239.1 | type IV secretion system protein TraC | - |
| GZS13_RS24180 () | 78651..78872 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| GZS13_RS24185 () | 79007..79522 | - | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GZS13_RS24190 () | 79519..79770 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| GZS13_RS24195 () | 79763..80116 | - | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| GZS13_RS24200 () | 80070..80654 | - | 585 | WP_000002795.1 | conjugal transfer protein TraP | - |
| GZS13_RS24205 () | 80644..82071 | - | 1428 | WP_000146638.1 | conjugal transfer protein TraB | - |
| GZS13_RS24210 () | 82071..82775 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| GZS13_RS24215 () | 82786..83352 | - | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| GZS13_RS24220 () | 83374..83685 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| GZS13_RS24225 () | 83690..84052 | - | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| GZS13_RS24230 () | 84086..84313 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| GZS13_RS24235 () | 84407..85093 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| GZS13_RS24240 () | 85287..85670 | - | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| GZS13_RS24245 () | 85956..86603 | + | 648 | WP_000614282.1 | hypothetical protein | VF |
| GZS13_RS24250 () | 86900..87721 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| GZS13_RS24255 () | 87842..88129 | - | 288 | WP_000107537.1 | hypothetical protein | - |
| GZS13_RS24265 () | 89048..89206 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 89250..89474 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 89250..89474 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 89250..89474 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 89250..89474 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| GZS13_RS24270 () | 89286..89474 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| GZS13_RS24275 () | 89486..90205 | - | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| GZS13_RS24280 () | 90202..90636 | - | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| GZS13_RS24285 () | 90691..92649 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| GZS13_RS24290 () | 92708..92941 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| GZS13_RS24295 () | 92997..93524 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| GZS13_RS24305 () | 93994..94242 | - | 249 | WP_071606928.1 | hypothetical protein | - |
| GZS13_RS24310 () | 94394..94957 | - | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| GZS13_RS24315 () | 95004..96058 | - | 1055 | Protein_114 | DUF3560 domain-containing protein | - |
| GZS13_RS24320 () | 96110..96340 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| GZS13_RS24325 () | 97375..97566 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| GZS13_RS24330 () | 97563..97985 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| GZS13_RS24335 () | 98032..98334 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| GZS13_RS24345 () | 98874..99650 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| GZS13_RS24350 () | 99701..100135 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| GZS13_RS24355 () | 100149..100370 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| GZS13_RS24360 () | 100371..101054 | - | 684 | WP_000086185.1 | DNA methylase | - |
| GZS13_RS24365 () | 101131..101435 | - | 305 | Protein_123 | hypothetical protein | - |
| GZS13_RS24370 () | 101439..102341 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| GZS13_RS24375 () | 103208..104179 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| GZS13_RS24380 () | 104179..105345 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| GZS13_RS24385 () | 105933..106688 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| GZS13_RS24390 () | 107462..108268 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| GZS13_RS24395 () | 108269..108574 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| GZS13_RS24400 () | 108576..108794 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| GZS13_RS24405 () | 109340..109852 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| GZS13_RS24410 () | 109886..111019 | - | 1134 | WP_000545986.1 | DUF3800 domain-containing protein | - |
| GZS13_RS24415 () | 111186..111959 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| GZS13_RS24420 () | 111972..112472 | - | 501 | WP_000528932.1 | hypothetical protein | - |
| GZS13_RS24425 () | 112737..112967 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GZS13_RS24430 () | 112964..113380 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GZS13_RS24435 () | 113425..117219 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| GZS13_RS24440 () | 117600..117830 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GZS13_RS24445 () | 117827..118243 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GZS13_RS24450 () | 118318..119883 | + | 1566 | WP_162656972.1 | AAA family ATPase | - |
| GZS13_RS24455 () | 119868..120890 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| GZS13_RS24460 () | 121144..121841 | - | 698 | Protein_142 | IS1 family transposase IS1S | Transposase |
| GZS13_RS24465 () | 122197..123111 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| GZS13_RS24470 () | 123111..123938 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| GZS13_RS24475 () | 123935..124792 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| GZS13_RS24480 () | 124789..125646 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| GZS13_RS24485 () | 125880..126137 | - | 258 | Protein_147 | Tn3 family transposase | - |
| GZS13_RS24490 () | 126135..126548 | + | 414 | Protein_148 | phosphopyruvate hydratase | - |
| GZS13_RS24500 () | 127050..127747 | + | 698 | Protein_149 | IS1 family transposase IS1S | Transposase |
| GZS13_RS24505 () | 127927..128440 | - | 514 | Protein_150 | DUF4113 domain-containing protein | - |
| GZS13_RS25305 () | 128501..128605 | - | 105 | Protein_151 | AAA family ATPase | - |
| GZS13_RS24510 () | 128607..128930 | - | 324 | Protein_152 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|