MGE detailed information
MGE type: Prophage MGE length: 28577 bp
Accession: NZ_CP047550 Location: 2140221..2168797 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10057 Replicon: chromosome
Accession: NZ_CP047550 Location: 2140221..2168797 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10057 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN07_RS10445 () | 2136458..2136748 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DXN07_RS10450 () | 2136816..2137169 | + | 354 | WP_001042119.1 | protein YebF | - |
| DXN07_RS10455 () | 2137263..2137922 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| DXN07_RS10460 () | 2138135..2140186 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| DXN07_RS10465 () | 2140221..2140919 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| DXN07_RS10470 () | 2140943..2141599 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| DXN07_RS10475 () | 2141707..2141937 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| DXN07_RS10480 () | 2142075..2142449 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DXN07_RS10485 () | 2142450..2143325 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| DXN07_RS10490 () | 2143342..2143695 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2143795..2143940 | - | 146 | - | - | Antitoxin Detail |
| - | 2143835..2143938 | + | 104 | - | - | Toxin Detail |
| DXN07_RS10495 () | 2144069..2144992 | - | 924 | Protein_2058 | Putative NAD(P)H nitroreductase YodC ; Integrase | Integrase |
| DXN07_RS10500 () | 2145256..2145717 | - | 462 | Protein_2059 | DNA breaking-rejoining protein | - |
| DXN07_RS10505 () | 2145706..2145897 | + | 192 | Protein_2060 | glycoside hydrolase family 19 protein | - |
| DXN07_RS10510 () | 2145951..2146484 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| DXN07_RS10515 () | 2146741..2146908 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| DXN07_RS10520 () | 2146973..2147161 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| DXN07_RS10525 () | 2147216..2147476 | + | 261 | Protein_2064 | DUF1441 family protein | - |
| DXN07_RS10530 () | 2147691..2148035 | + | 345 | Protein_2065 | macro domain-containing protein | - |
| DXN07_RS10535 () | 2148045..2148515 | + | 471 | Protein_2066 | tail fiber assembly protein | - |
| DXN07_RS10540 () | 2148612..2148812 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DXN07_RS10545 () | 2149202..2149382 | - | 181 | Protein_2068 | IS3 family transposase | - |
| DXN07_RS10550 () | 2149382..2149507 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| DXN07_RS25800 () | 2150021..2150167 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| DXN07_RS10555 () | 2150161..2150328 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| DXN07_RS10560 () | 2150655..2151269 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DXN07_RS10565 () | 2151279..2151437 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DXN07_RS10570 () | 2151570..2152484 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| DXN07_RS10575 () | 2153797..2154219 | - | 423 | Protein_2075 | Tetracycline resistance protein TetO ; Integrase | Integrase |
| DXN07_RS10580 () | 2154289..2155483 | + | 1195 | Protein_2076 | IS256 family transposase IS285 | Transposase |
| DXN07_RS10585 () | 2155629..2155769 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| DXN07_RS10590 () | 2155935..2156204 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| DXN07_RS10595 () | 2156574..2156993 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| DXN07_RS10600 () | 2157381..2157857 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| DXN07_RS10605 () | 2158187..2158582 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| DXN07_RS10610 () | 2159265..2159987 | + | 723 | WP_000182072.1 | Zinc-type alcohol dehydrogenase-like protein | VF |
| DXN07_RS10615 () | 2160272..2160436 | + | 165 | WP_001134856.1 | membrane protein | - |
| DXN07_RS10620 () | 2160660..2161310 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| DXN07_RS10625 () | 2161329..2161520 | - | 192 | WP_000457836.1 | YebW family protein | - |
| DXN07_RS10630 () | 2161631..2161867 | - | 237 | WP_024131108.1 | YebV family protein | - |
| DXN07_RS10635 () | 2161985..2163424 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXN07_RS10640 () | 2163502..2166135 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| DXN07_RS10645 () | 2166104..2167387 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| DXN07_RS10650 () | 2167516..2168013 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DXN07_RS10655 () | 2168111..2168797 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| DXN07_RS10660 () | 2168817..2170865 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| DXN07_RS10665 () | 2171059..2171940 | + | 882 | WP_000984498.1 | protease HtpX | - |
| DXN07_RS10670 () | 2171988..2173361 | - | 1374 | WP_000416128.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.007 |