MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP047548 Location: 3961767..3961943 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10169 Replicon: chromosome
Accession: NZ_CP047548 Location: 3961767..3961943 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10169 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN26_RS19445 (3956830) | 3956830..3957480 | - | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| DXN26_RS19450 (3957937) | 3957937..3958380 | + | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| DXN26_RS19455 (3958811) | 3958811..3959260 | + | 450 | WP_000381610.1 | membrane protein | - |
| DXN26_RS19460 (3959245) | 3959245..3959592 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| DXN26_RS19465 (3959865) | 3959865..3960191 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| DXN26_RS19470 (3960432) | 3960432..3960610 | + | 179 | Protein_3790 | IS3 family transposase | - |
| DXN26_RS19475 (3960880) | 3960880..3961170 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DXN26_RS19480 (3961167) | 3961167..3961694 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DXN26_RS19485 (3961767) | 3961767..3961972 | - | 206 | Protein_3793 | IS5 family transposase ISEcl3 | Transposase |
| DXN26_RS19490 (3962319) | 3962319..3962975 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| DXN26_RS19495 (3963147) | 3963147..3963668 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| DXN26_RS19500 (3963827) | 3963827..3966394 | + | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| DXN26_RS19505 (3966450) | 3966450..3966830 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |