MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP047546 Location: 1027713..1027889 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 Replicon: chromosome
Accession: NZ_CP047546 Location: 1027713..1027889 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10236 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN28_RS04915 (1022826) | 1022826..1023206 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| DXN28_RS04920 (1023262) | 1023262..1025829 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| DXN28_RS04925 (1025988) | 1025988..1026509 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| DXN28_RS04930 (1026681) | 1026681..1027337 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| DXN28_RS04935 (1027684) | 1027684..1027889 | + | 206 | Protein_971 | IS5 family transposase ISEcl3 | Transposase |
| DXN28_RS04940 (1027962) | 1027962..1028489 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DXN28_RS04945 (1028486) | 1028486..1028776 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DXN28_RS04950 (1029046) | 1029046..1029224 | - | 179 | Protein_974 | IS3 family transposase | - |
| DXN28_RS04955 (1029465) | 1029465..1029791 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| DXN28_RS04960 (1030064) | 1030064..1030411 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| DXN28_RS04965 (1030396) | 1030396..1030845 | - | 450 | WP_000381610.1 | membrane protein | - |
| DXN28_RS04970 (1031276) | 1031276..1031719 | - | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| DXN28_RS04975 (1032176) | 1032176..1032826 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |