MGE detailed information
MGE type: Prophage MGE length: 39995 bp
Accession: NZ_CP047531 Location: 2126538..2166532 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 Replicon: chromosome
Accession: NZ_CP047531 Location: 2126538..2166532 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10484 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN09_RS10370 () | 2122639..2124450 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| DXN09_RS10375 () | 2124488..2125129 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DXN09_RS10380 () | 2125229..2126407 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DXN09_RS10385 () | 2126538..2126828 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DXN09_RS10390 () | 2126896..2127249 | + | 354 | WP_001042119.1 | protein YebF | - |
| DXN09_RS10395 () | 2127343..2128002 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| DXN09_RS10400 () | 2128215..2130266 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| DXN09_RS10405 () | 2130301..2130999 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| DXN09_RS10410 () | 2131023..2131679 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| DXN09_RS10415 () | 2131787..2132017 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| DXN09_RS10420 () | 2132155..2132529 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DXN09_RS10425 () | 2132530..2133405 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| DXN09_RS10430 () | 2133422..2133775 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2133875..2134020 | - | 146 | - | - | Antitoxin Detail |
| - | 2133915..2134018 | + | 104 | - | - | Toxin Detail |
| DXN09_RS10435 () | 2134149..2135072 | - | 924 | Protein_2046 | hypothetical protein ; Integrase | Integrase |
| DXN09_RS10440 () | 2135336..2135797 | - | 462 | Protein_2047 | DNA breaking-rejoining protein | - |
| DXN09_RS10445 () | 2135786..2135977 | + | 192 | Protein_2048 | glycoside hydrolase family 19 protein | - |
| DXN09_RS10450 () | 2136031..2136564 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| DXN09_RS10455 () | 2136821..2136988 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| DXN09_RS10460 () | 2137053..2137241 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| DXN09_RS10465 () | 2137296..2137556 | + | 261 | Protein_2052 | DUF1441 family protein | - |
| DXN09_RS10470 () | 2137771..2138115 | + | 345 | Protein_2053 | macro domain-containing protein | - |
| DXN09_RS10475 () | 2138125..2138595 | + | 471 | Protein_2054 | tail fiber assembly protein | - |
| DXN09_RS10480 () | 2138692..2138892 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DXN09_RS10485 () | 2139282..2139462 | - | 181 | Protein_2056 | IS3 family transposase | - |
| DXN09_RS10490 () | 2139462..2139587 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| DXN09_RS25550 () | 2140101..2140247 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| DXN09_RS10495 () | 2140241..2140408 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| DXN09_RS10500 () | 2140735..2141349 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DXN09_RS10505 () | 2141359..2141517 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DXN09_RS10510 () | 2141650..2142564 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| DXN09_RS10515 () | 2143877..2144299 | - | 423 | Protein_2063 | hypothetical protein ; Integrase | Integrase |
| DXN09_RS10520 () | 2144369..2145563 | + | 1195 | Protein_2064 | IS256 family transposase IS285 | Transposase |
| DXN09_RS10525 () | 2145709..2145849 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| DXN09_RS10530 () | 2146015..2146284 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| DXN09_RS10535 () | 2146654..2147073 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| DXN09_RS10540 () | 2147461..2147937 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| DXN09_RS10545 () | 2148267..2148662 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| DXN09_RS10550 () | 2149345..2150067 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| DXN09_RS10555 () | 2150352..2150516 | + | 165 | WP_001134856.1 | membrane protein | - |
| DXN09_RS10560 () | 2150740..2151390 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| DXN09_RS10565 () | 2151409..2151600 | - | 192 | WP_000457836.1 | YebW family protein | - |
| DXN09_RS10570 () | 2151711..2151947 | - | 237 | WP_024131108.1 | YebV family protein | - |
| DXN09_RS10575 () | 2152065..2153504 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXN09_RS10580 () | 2153582..2156215 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| DXN09_RS10585 () | 2156184..2157467 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| DXN09_RS10590 () | 2157596..2158093 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DXN09_RS10595 () | 2158191..2158877 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| DXN09_RS10600 () | 2158897..2160945 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| DXN09_RS10605 () | 2161139..2162020 | + | 882 | WP_000984498.1 | protease HtpX | - |
| DXN09_RS10610 () | 2162068..2163441 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| DXN09_RS10615 () | 2163617..2164408 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| DXN09_RS10620 () | 2164620..2164859 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| DXN09_RS10625 () | 2165017..2165160 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| DXN09_RS10630 () | 2165231..2165518 | + | 288 | WP_001000660.1 | YebO family protein | - |
| DXN09_RS10635 () | 2166167..2166310 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| DXN09_RS10640 () | 2166323..2166532 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| DXN09_RS10645 () | 2166752..2168497 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| DXN09_RS10650 () | 2168563..2169372 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| DXN09_RS10655 () | 2169369..2169935 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| DXN09_RS10660 () | 2170345..2170803 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.001 |