MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP047529 Location: 3950299..3950475 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10640 Replicon: chromosome
Accession: NZ_CP047529 Location: 3950299..3950475 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10640 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN10_RS19360 (3945362) | 3945362..3946012 | - | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
| DXN10_RS19365 (3946469) | 3946469..3946912 | + | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| DXN10_RS19370 (3947343) | 3947343..3947792 | + | 450 | WP_000381610.1 | membrane protein | - |
| DXN10_RS19375 (3947777) | 3947777..3948124 | + | 348 | WP_001669174.1 | DUF1493 family protein | - |
| DXN10_RS19380 (3948397) | 3948397..3948723 | - | 327 | WP_000393302.1 | hypothetical protein | - |
| DXN10_RS19385 (3948964) | 3948964..3949142 | + | 179 | Protein_3772 | IS3 family transposase | - |
| DXN10_RS19390 (3949412) | 3949412..3949702 | + | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DXN10_RS19395 (3949699) | 3949699..3950226 | + | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DXN10_RS19400 (3950299) | 3950299..3950504 | - | 206 | Protein_3775 | IS5 family transposase ISEcl3 | Transposase |
| DXN10_RS19405 (3950851) | 3950851..3951507 | + | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| DXN10_RS19410 (3951679) | 3951679..3952200 | - | 522 | WP_000858988.1 | hypothetical protein | - |
| DXN10_RS19415 (3952359) | 3952359..3954926 | + | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| DXN10_RS19420 (3954982) | 3954982..3955362 | - | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |