MGE detailed information
MGE type: Prophage MGE length: 10744 bp
Accession: NZ_CP047522 Location: 4618898..4629641 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Replicon: chromosome
Accession: NZ_CP047522 Location: 4618898..4629641 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN15_RS22600 (4614554) | 4614554..4615525 | + | 972 | WP_001038948.1 | DMT family transporter | - |
| DXN15_RS22605 (4615522) | 4615522..4616556 | + | 1035 | WP_000675710.1 | phosphotriesterase | - |
| DXN15_RS22610 (4616601) | 4616601..4618343 | - | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| DXN15_RS22615 (4618469) | 4618469..4618885 | + | 417 | WP_000826041.1 | DUF2756 family protein | - |
| DXN15_RS22620 (4618898) | 4618898..4619638 | - | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| DXN15_RS22625 (4619635) | 4619635..4620705 | - | 1071 | WP_000907838.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DXN15_RS22630 (4620707) | 4620707..4621552 | - | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| DXN15_RS22635 (4621549) | 4621549..4622436 | - | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| DXN15_RS22640 (4622500) | 4622500..4623816 | - | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| DXN15_RS22645 (4624075) | 4624075..4624443 | - | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DXN15_RS22650 (4624440) | 4624440..4624661 | - | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DXN15_RS22655 (4624793) | 4624793..4625506 | - | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| DXN15_RS22660 (4625508) | 4625508..4626275 | - | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DXN15_RS22665 (4626272) | 4626272..4627549 | - | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| DXN15_RS22670 (4627546) | 4627546..4628472 | - | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| DXN15_RS22675 (4628532) | 4628532..4629641 | - | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| DXN15_RS22680 (4630063) | 4630063..4630446 | + | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| DXN15_RS22685 (4630424) | 4630424..4630558 | + | 135 | WP_001517957.1 | hypothetical protein | - |
| DXN15_RS22690 (4630641) | 4630641..4631744 | - | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| DXN15_RS22695 (4632066) | 4632066..4632920 | - | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| DXN15_RS22700 (4633166) | 4633166..4634221 | - | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.006 |