MGE detailed information
MGE type: Genomic_island MGE length: 10581 bp
Accession: NZ_CP047522 Location: 4050921..4061501 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Replicon: chromosome
Accession: NZ_CP047522 Location: 4050921..4061501 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN15_RS19740 (4046861) | 4046861..4047316 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| DXN15_RS19745 (4047458) | 4047458..4048687 | + | 1230 | WP_000036825.1 | amino acid permease | - |
| DXN15_RS19750 (4048718) | 4048718..4048990 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| DXN15_RS19755 (4049112) | 4049112..4049966 | + | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| DXN15_RS19760 (4050176) | 4050176..4050934 | - | 759 | WP_000134791.1 | transcriptional regulator | - |
| DXN15_RS19765 (4050921) | 4050921..4051433 | - | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| DXN15_RS19770 (4051577) | 4051577..4052653 | - | 1077 | WP_000141329.1 | outer membrane protein | - |
| DXN15_RS19775 (4052650) | 4052650..4053393 | - | 744 | WP_000798504.1 | hypothetical protein | VF |
| DXN15_RS19780 (4053434) | 4053434..4055923 | - | 2490 | WP_000705483.1 | hypothetical protein | VF |
| DXN15_RS19785 (4056043) | 4056043..4056627 | - | 585 | WP_001244638.1 | hypothetical protein | VF |
| DXN15_RS19790 (4057346) | 4057346..4057978 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| DXN15_RS19795 (4058025) | 4058025..4058561 | - | 537 | WP_001038506.1 | hypothetical protein | VF |
| DXN15_RS19800 (4059367) | 4059367..4059765 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DXN15_RS19805 (4059765) | 4059765..4059992 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| DXN15_RS19810 (4060169) | 4060169..4060420 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| DXN15_RS19815 (4060695) | 4060695..4061501 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| DXN15_RS19825 (4061786) | 4061786..4062544 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| DXN15_RS19830 (4062809) | 4062809..4063354 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| DXN15_RS19835 (4063430) | 4063430..4064947 | - | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.002 |