MGE detailed information
MGE type: Prophage MGE length: 39995 bp
Accession: NZ_CP047522 Location: 2819709..2859703 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Replicon: chromosome
Accession: NZ_CP047522 Location: 2819709..2859703 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF11216 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN15_RS13750 () | 2815438..2815896 | + | 459 | WP_000156280.1 | DUF986 family protein | - |
| DXN15_RS13755 () | 2816306..2816872 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| DXN15_RS13760 () | 2816869..2817678 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| DXN15_RS13765 () | 2817744..2819489 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| DXN15_RS13770 () | 2819709..2819918 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| DXN15_RS13775 () | 2819931..2820074 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| DXN15_RS13780 () | 2820723..2821010 | - | 288 | WP_001000660.1 | YebO family protein | - |
| DXN15_RS13785 () | 2821081..2821224 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| DXN15_RS13790 () | 2821382..2821621 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| DXN15_RS13795 () | 2821833..2822624 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| DXN15_RS13800 () | 2822800..2824173 | + | 1374 | WP_000416128.1 | MFS transporter | - |
| DXN15_RS13805 () | 2824221..2825102 | - | 882 | WP_000984498.1 | protease HtpX | - |
| DXN15_RS13810 () | 2825296..2827344 | - | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| DXN15_RS13815 () | 2827364..2828050 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| DXN15_RS13820 () | 2828148..2828645 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| DXN15_RS13825 () | 2828774..2830057 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| DXN15_RS13830 () | 2830026..2832659 | + | 2634 | WP_001535256.1 | hypothetical protein | VF |
| DXN15_RS13835 () | 2832737..2834176 | + | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXN15_RS13840 () | 2834294..2834530 | + | 237 | WP_024131108.1 | YebV family protein | - |
| DXN15_RS13845 () | 2834641..2834832 | + | 192 | WP_000457836.1 | YebW family protein | - |
| DXN15_RS13850 () | 2834851..2835501 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| DXN15_RS13855 () | 2835725..2835889 | - | 165 | WP_001134856.1 | membrane protein | - |
| DXN15_RS13860 () | 2836174..2836896 | - | 723 | WP_000182072.1 | hypothetical protein | VF |
| DXN15_RS13865 () | 2837579..2837974 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| DXN15_RS13870 () | 2838304..2838780 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| DXN15_RS13875 () | 2839168..2839587 | - | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| DXN15_RS13880 () | 2839957..2840226 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| DXN15_RS13885 () | 2840392..2840532 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| DXN15_RS13890 () | 2840678..2841872 | - | 1195 | Protein_2698 | IS256 family transposase IS285 | Transposase |
| DXN15_RS13895 () | 2841942..2842364 | + | 423 | Protein_2699 | hypothetical protein ; Integrase | Integrase |
| DXN15_RS13900 () | 2843677..2844591 | + | 915 | WP_001233446.1 | DMT family transporter | - |
| DXN15_RS13905 () | 2844724..2844882 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| DXN15_RS13910 () | 2844892..2845506 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| DXN15_RS13915 () | 2845833..2846000 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| DXN15_RS25620 () | 2845994..2846140 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| DXN15_RS13920 () | 2846654..2846779 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| DXN15_RS13925 () | 2846779..2846959 | + | 181 | Protein_2706 | IS3 family transposase | - |
| DXN15_RS13930 () | 2847349..2847549 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| DXN15_RS13935 () | 2847646..2848116 | - | 471 | Protein_2708 | tail fiber assembly protein | - |
| DXN15_RS13940 () | 2848126..2848470 | - | 345 | Protein_2709 | macro domain-containing protein | - |
| DXN15_RS13945 () | 2848685..2848945 | - | 261 | Protein_2710 | DUF1441 family protein | - |
| DXN15_RS13950 () | 2849000..2849188 | + | 189 | WP_001521334.1 | hypothetical protein | - |
| DXN15_RS13955 () | 2849253..2849420 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| DXN15_RS13960 () | 2849677..2850210 | - | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| DXN15_RS13965 () | 2850264..2850455 | - | 192 | Protein_2714 | glycoside hydrolase family 19 protein | - |
| DXN15_RS13970 () | 2850444..2850905 | + | 462 | Protein_2715 | DNA breaking-rejoining protein | - |
| DXN15_RS13975 () | 2851169..2852092 | + | 924 | Protein_2716 | hypothetical protein ; Integrase | Integrase |
| - | 2852221..2852366 | + | 146 | - | - | Antitoxin Detail |
| - | 2852223..2852326 | - | 104 | - | - | Toxin Detail |
| DXN15_RS13980 () | 2852466..2852819 | - | 354 | WP_000722368.1 | YebY family protein | - |
| DXN15_RS13985 () | 2852836..2853711 | - | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| DXN15_RS13990 () | 2853712..2854086 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| DXN15_RS13995 () | 2854224..2854454 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| DXN15_RS14000 () | 2854562..2855218 | + | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| DXN15_RS14005 () | 2855242..2855940 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| DXN15_RS14010 () | 2855975..2858026 | - | 2052 | WP_000936999.1 | oligopeptidase B | - |
| DXN15_RS14015 () | 2858239..2858898 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| DXN15_RS14020 () | 2858992..2859345 | - | 354 | WP_001042119.1 | protein YebF | - |
| DXN15_RS14025 () | 2859413..2859703 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| DXN15_RS14030 () | 2859834..2861012 | + | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DXN15_RS14035 () | 2861112..2861753 | - | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DXN15_RS14040 () | 2861791..2863602 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.001 |