MGE detailed information
MGE type: Integron MGE length: 70914 bp
Accession: NZ_CP046748 Location: 597132..668045 Organism: Vibrio cholerae strain 3541-04 Replicon: chromosome
Accession: NZ_CP046748 Location: 597132..668045 Organism: Vibrio cholerae strain 3541-04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY00_RS16755 () | 594993..595398 | - | 406 | Protein_512 | VOC family protein | - |
| GPY00_RS16760 () | 595680..596639 | + | 960 | Protein_513 | IS30 family transposase | - |
| GPY00_RS16765 () | 596778..596956 | + | 179 | Protein_514 | RNA-binding protein | - |
| GPY00_RS16770 () | 597132..597644 | - | 513 | WP_019829603.1 | hypothetical protein | - |
| GPY00_RS16775 () | 597847..598029 | - | 183 | WP_001907633.1 | DUF645 family protein | - |
| GPY00_RS16780 () | 598325..598813 | - | 489 | WP_044128169.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS16785 () | 599004..599186 | - | 183 | WP_032473174.1 | DUF645 family protein | - |
| GPY00_RS16790 () | 599491..599904 | - | 414 | WP_019829604.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS16795 () | 600043..600876 | - | 834 | WP_019829653.1 | hypothetical protein | - |
| GPY00_RS16800 () | 601026..601361 | - | 336 | WP_019829648.1 | hypothetical protein | - |
| GPY00_RS16805 () | 601687..601862 | - | 176 | Protein_522 | DUF3709 domain-containing protein | - |
| GPY00_RS16810 () | 601859..602045 | - | 187 | Protein_523 | DUF3709 domain-containing protein | - |
| GPY00_RS16815 () | 602148..602663 | - | 516 | WP_044128208.1 | hypothetical protein | - |
| GPY00_RS16820 () | 602800..603084 | - | 285 | WP_000048765.1 | antibiotic biosynthesis monooxygenase | - |
| GPY00_RS16825 () | 603128..603199 | - | 72 | Protein_526 | N-acetyltransferase | - |
| GPY00_RS16830 () | 603858..604274 | - | 417 | WP_019830302.1 | DUF1311 domain-containing protein | - |
| GPY00_RS16835 () | 604423..605274 | - | 852 | WP_019829468.1 | hypothetical protein | - |
| GPY00_RS16840 () | 605420..606067 | - | 648 | WP_044128203.1 | glutathione S-transferase family protein | - |
| GPY00_RS16845 () | 606320..607279 | + | 960 | WP_113592640.1 | IS30 family transposase ISVvu6 | Transposase |
| GPY00_RS16850 () | 607302..607718 | - | 417 | WP_158128766.1 | hypothetical protein | - |
| GPY00_RS16860 () | 607883..608536 | - | 654 | WP_019829910.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| GPY00_RS16870 () | 608686..609264 | - | 579 | WP_001020574.1 | DJ-1/PfpI family protein | - |
| GPY00_RS16875 () | 609418..610056 | - | 639 | WP_019829928.1 | hypothetical protein | - |
| GPY00_RS16880 () | 610191..610688 | - | 498 | WP_005526565.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS16885 () | 610893..611063 | - | 171 | WP_000483444.1 | DUF645 family protein | - |
| GPY00_RS16890 () | 611403..611807 | - | 405 | WP_019829940.1 | hypothetical protein | - |
| GPY00_RS16895 () | 612054..612326 | + | 273 | WP_019829878.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GPY00_RS16900 () | 612323..612820 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GPY00_RS16905 () | 612955..613914 | - | 960 | WP_044128144.1 | restriction endonuclease | - |
| GPY00_RS16910 () | 614501..614956 | - | 456 | WP_001245329.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS16915 () | 615083..615514 | - | 432 | WP_044128141.1 | hypothetical protein | - |
| GPY00_RS16920 () | 615655..616428 | - | 774 | WP_139284613.1 | hypothetical protein | - |
| GPY00_RS16925 () | 616562..617046 | - | 485 | Protein_544 | DUF1993 family protein | - |
| GPY00_RS16930 () | 617204..617593 | - | 390 | WP_000491261.1 | VOC family protein | - |
| GPY00_RS16935 () | 617797..618249 | - | 453 | WP_032473166.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS16940 () | 618401..618841 | - | 441 | WP_032473167.1 | DUF1311 domain-containing protein | - |
| GPY00_RS16945 () | 619126..619344 | - | 219 | WP_044128180.1 | DUF3709 domain-containing protein | - |
| GPY00_RS16950 () | 619631..620167 | - | 537 | WP_044128182.1 | nucleotidyltransferase family protein | - |
| GPY00_RS16960 () | 620322..620738 | - | 417 | WP_019830302.1 | DUF1311 domain-containing protein | - |
| GPY00_RS16965 () | 620882..621127 | - | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| GPY00_RS16970 () | 621114..621380 | - | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| GPY00_RS16975 () | 621555..622346 | - | 792 | WP_044128164.1 | hypothetical protein | - |
| GPY00_RS16980 () | 622350..622712 | - | 363 | WP_044128165.1 | hypothetical protein | - |
| GPY00_RS16990 () | 622852..623592 | - | 741 | WP_161779866.1 | PhzF family phenazine biosynthesis protein | - |
| GPY00_RS16995 () | 623757..624227 | - | 471 | WP_071181473.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS17000 () | 624432..624602 | - | 171 | WP_158128767.1 | DUF645 family protein | - |
| GPY00_RS17010 () | 624906..625442 | - | 537 | WP_019829934.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS17015 () | 625648..625819 | - | 172 | Protein_559 | DUF645 family protein | - |
| GPY00_RS17020 () | 626183..626364 | - | 182 | Protein_560 | DUF645 family protein | - |
| GPY00_RS17025 () | 626657..627244 | - | 588 | WP_052382165.1 | hypothetical protein | - |
| GPY00_RS17030 () | 627498..627599 | - | 102 | Protein_562 | DUF645 family protein | - |
| GPY00_RS17035 () | 627928..628323 | - | 396 | WP_044128232.1 | DUF3465 domain-containing protein | - |
| GPY00_RS17040 () | 628489..629205 | - | 717 | WP_044128153.1 | class I SAM-dependent methyltransferase | - |
| GPY00_RS17045 () | 629389..629805 | - | 417 | WP_019830302.1 | DUF1311 domain-containing protein | - |
| GPY00_RS17050 () | 629956..630435 | - | 480 | WP_032473214.1 | hypothetical protein | - |
| GPY00_RS17055 () | 630571..631005 | - | 435 | WP_044128155.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS17060 () | 631163..631645 | - | 483 | WP_032473215.1 | tetratricopeptide repeat protein | - |
| GPY00_RS17065 () | 631855..632097 | + | 243 | WP_001107720.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| GPY00_RS17070 () | 632094..632393 | + | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY00_RS17075 () | 632401..632511 | - | 111 | WP_072599357.1 | DUF3265 domain-containing protein | - |
| GPY00_RS17080 () | 632508..632861 | - | 354 | WP_019829948.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| GPY00_RS19185 () | 633060..633230 | - | 171 | WP_000483444.1 | DUF645 family protein | - |
| GPY00_RS17090 () | 633549..633974 | - | 426 | WP_025987830.1 | hypothetical protein | - |
| GPY00_RS19190 () | 634204..634866 | - | 663 | WP_000084911.1 | Streptogramin A acetyltransferase | VF |
| GPY00_RS17100 () | 635084..636043 | + | 960 | WP_113592640.1 | IS30 family transposase ISVvu6 | Transposase |
| GPY00_RS17105 () | 636066..636425 | - | 360 | WP_019830329.1 | VOC family protein | - |
| GPY00_RS19195 () | 636635..636809 | - | 175 | Protein_578 | DUF645 family protein | - |
| GPY00_RS17125 () | 637110..637598 | - | 489 | WP_000424237.1 | hypothetical protein | - |
| GPY00_RS17130 () | 637741..638205 | - | 465 | WP_044128121.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS17135 () | 638359..638754 | - | 396 | WP_044128118.1 | DUF3465 domain-containing protein | - |
| GPY00_RS17140 () | 638922..639374 | - | 453 | WP_142735417.1 | hypothetical protein | - |
| GPY00_RS17145 () | 639525..639911 | - | 387 | WP_000703163.1 | VOC family protein | - |
| GPY00_RS17150 () | 640255..640452 | - | 198 | Protein_584 | DUF3709 domain-containing protein | - |
| GPY00_RS17155 () | 640758..640934 | - | 177 | WP_033928092.1 | DUF645 family protein | - |
| GPY00_RS17160 () | 641245..641640 | - | 396 | WP_044128232.1 | DUF3465 domain-containing protein | - |
| GPY00_RS17165 () | 641796..642596 | - | 801 | WP_080285823.1 | PhzF family phenazine biosynthesis isomerase | - |
| GPY00_RS17170 () | 642765..643355 | - | 591 | WP_079993831.1 | hypothetical protein | - |
| GPY00_RS17175 () | 643507..643923 | - | 417 | WP_044128115.1 | hypothetical protein | - |
| GPY00_RS17180 () | 644063..644551 | - | 489 | WP_044128114.1 | hypothetical protein | - |
| GPY00_RS17185 () | 644702..645193 | - | 492 | WP_032474179.1 | hypothetical protein | - |
| GPY00_RS17190 () | 645391..645510 | - | 120 | WP_080285852.1 | DUF645 family protein | - |
| GPY00_RS17195 () | 645856..646200 | - | 345 | WP_000361940.1 | hypothetical protein | - |
| GPY00_RS17205 () | 646335..647048 | - | 714 | WP_000126165.1 | Fic family protein | - |
| GPY00_RS17210 () | 648148..648258 | - | 111 | WP_081024888.1 | DUF3265 domain-containing protein | - |
| GPY00_RS17215 () | 648255..648704 | - | 450 | WP_044128179.1 | DUF2513 domain-containing protein | - |
| GPY00_RS17220 () | 648878..649429 | - | 552 | WP_044128178.1 | Maltose O-acetyltransferase | VF |
| GPY00_RS17225 () | 649589..650005 | - | 417 | WP_199252430.1 | DUF4144 domain-containing protein | - |
| GPY00_RS17235 () | 650055..650525 | - | 471 | WP_158128768.1 | hypothetical protein | - |
| GPY00_RS17240 () | 650736..650903 | - | 168 | WP_158128769.1 | DUF645 family protein | - |
| GPY00_RS17250 () | 651208..651621 | - | 414 | WP_000049411.1 | VOC family protein | - |
| GPY00_RS17255 () | 651804..652298 | - | 495 | WP_158128770.1 | GNAT family N-acetyltransferase | - |
| GPY00_RS19200 () | 652495..652591 | - | 97 | Protein_603 | DUF645 family protein | - |
| GPY00_RS17270 () | 653000..653181 | - | 182 | Protein_604 | DUF645 family protein | - |
| GPY00_RS17280 () | 653475..654413 | - | 939 | WP_055032204.1 | 5'-nucleotidase | - |
| GPY00_RS17285 () | 654563..654958 | - | 396 | WP_188006232.1 | DUF3465 domain-containing protein | - |
| GPY00_RS17290 () | 655167..655346 | - | 180 | Protein_607 | DUF645 family protein | - |
| GPY00_RS17300 () | 655651..656166 | - | 516 | WP_158128774.1 | lipocalin family protein | - |
| GPY00_RS17305 () | 656310..656759 | - | 450 | WP_044128175.1 | GyrI-like domain-containing protein | - |
| GPY00_RS17310 () | 656897..657235 | - | 339 | WP_019829637.1 | hypothetical protein | - |
| GPY00_RS17320 () | 657896..658075 | - | 180 | WP_044128174.1 | DUF645 family protein | - |
| GPY00_RS17325 () | 658390..659028 | - | 639 | WP_019829928.1 | hypothetical protein | - |
| GPY00_RS17330 () | 659164..659742 | - | 579 | WP_001020574.1 | DJ-1/PfpI family protein | - |
| GPY00_RS17335 () | 660074..660247 | - | 174 | WP_080285841.1 | DUF3709 domain-containing protein | - |
| GPY00_RS17340 () | 660713..660865 | - | 153 | WP_199252431.1 | DUF3709 domain-containing protein | - |
| GPY00_RS17345 () | 661212..661394 | - | 183 | WP_199252432.1 | DUF645 family protein | - |
| GPY00_RS17350 () | 661578..661721 | - | 144 | WP_199252451.1 | DUF3265 domain-containing protein | - |
| GPY00_RS17355 () | 661691..662092 | - | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| GPY00_RS17360 () | 662092..662262 | - | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| GPY00_RS17365 () | 662502..662750 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPY00_RS17370 () | 662740..663030 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPY00_RS17375 () | 663048..663158 | - | 111 | Protein_622 | DUF3265 domain-containing protein | - |
| GPY00_RS17380 () | 663155..663913 | - | 759 | WP_055050422.1 | hypothetical protein | - |
| GPY00_RS17385 () | 664059..664415 | - | 357 | WP_033838071.1 | hypothetical protein | - |
| GPY00_RS17390 () | 664573..665220 | - | 648 | WP_044128203.1 | glutathione S-transferase family protein | - |
| GPY00_RS17395 () | 665398..665640 | - | 243 | WP_053034790.1 | hypothetical protein | - |
| GPY00_RS17405 () | 665840..666580 | - | 741 | WP_161779866.1 | PhzF family phenazine biosynthesis protein | - |
| GPY00_RS17410 () | 666745..667383 | - | 639 | WP_002051085.1 | HD domain-containing protein | - |
| GPY00_RS17415 () | 667530..668045 | - | 516 | WP_158128777.1 | hypothetical protein | - |
| GPY00_RS17420 () | 668341..669304 | + | 964 | Protein_630 | integron integrase IntIA | - |
| GPY00_RS17425 () | 669385..669738 | - | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| GPY00_RS17430 () | 669780..669974 | - | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| GPY00_RS17435 () | 670078..670629 | - | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| GPY00_RS17440 () | 670633..672561 | - | 1929 | WP_001121787.1 | threonine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|