MGE detailed information
MGE type: Integron MGE length: 50181 bp
Accession: NZ_CP046746 Location: 490782..540962 Organism: Vibrio cholerae strain 3566-08 Replicon: chromosome
Accession: NZ_CP046746 Location: 490782..540962 Organism: Vibrio cholerae strain 3566-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPW95_RS16510 | 485878..487266 | + | 1389 | WP_000221030.1 | IS4-like element ISVa18 family transposase | - |
| GPW95_RS16515 | 487525..489453 | + | 1929 | WP_001121787.1 | threonine--tRNA ligase | - |
| GPW95_RS16520 | 489457..490008 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| GPW95_RS16525 | 490112..490306 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| GPW95_RS16530 | 490348..490701 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| GPW95_RS16535 | 490782..491744 | - | 963 | WP_001887482.1 | IS91 family transposase ISAzo26 | Transposase |
| GPW95_RS16540 | 491990..492496 | + | 507 | WP_032473145.1 | hypothetical protein | - |
| GPW95_RS16545 | 492713..493102 | + | 390 | WP_005528039.1 | VOC family protein | - |
| GPW95_RS19260 | 493277..493618 | + | 342 | WP_032473164.1 | hypothetical protein | - |
| GPW95_RS19265 | 493679..493744 | + | 66 | Protein_420 | acetyltransferase | - |
| GPW95_RS16550 | 493913..494095 | + | 183 | WP_032473163.1 | DUF645 family protein | - |
| GPW95_RS16555 | 494309..495103 | + | 795 | WP_001887483.1 | hypothetical protein | - |
| GPW95_RS19270 | 495166..495228 | + | 63 | WP_229767289.1 | hypothetical protein | - |
| GPW95_RS16565 | 495402..495584 | + | 183 | WP_032473161.1 | DUF645 family protein | - |
| GPW95_RS16570 | 495942..496235 | + | 294 | WP_050501602.1 | hypothetical protein | - |
| GPW95_RS19275 | 496259..496330 | + | 72 | WP_229767290.1 | DUF3265 domain-containing protein | - |
| GPW95_RS16580 | 496386..496733 | + | 348 | WP_032473160.1 | hypothetical protein | - |
| GPW95_RS16585 | 496730..496840 | + | 111 | WP_114732487.1 | DUF3265 domain-containing protein | - |
| GPW95_RS16590 | 496877..497416 | + | 540 | WP_000884558.1 | hydrolase | - |
| GPW95_RS16595 | 497580..498404 | + | 825 | WP_148508194.1 | hypothetical protein | - |
| GPW95_RS19280 | 498397..498465 | + | 69 | Protein_431 | DUF3265 domain-containing protein | - |
| GPW95_RS16600 | 498551..498922 | + | 372 | WP_032473159.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| GPW95_RS16605 | 498979..499071 | + | 93 | WP_152554679.1 | acetyltransferase | - |
| GPW95_RS16610 | 499073..499531 | + | 459 | WP_032473158.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS16615 | 499686..500300 | + | 615 | WP_032473157.1 | hypothetical protein | - |
| GPW95_RS16620 | 500465..500842 | - | 378 | WP_000734783.1 | PEGA domain-containing protein | - |
| GPW95_RS16630 | 501063..501362 | - | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPW95_RS16635 | 501359..501601 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| GPW95_RS16640 | 501818..502306 | + | 489 | WP_000424237.1 | hypothetical protein | - |
| GPW95_RS16645 | 502514..503350 | + | 837 | WP_233275519.1 | hypothetical protein | - |
| GPW95_RS16650 | 503540..503926 | + | 387 | WP_043881269.1 | hypothetical protein | - |
| GPW95_RS16655 | 503983..504045 | + | 63 | Protein_442 | general secretion pathway protein GspI | - |
| GPW95_RS16660 | 504063..504497 | + | 435 | WP_001887495.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS16665 | 504644..505132 | + | 489 | WP_000110032.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS16670 | 505429..505611 | + | 183 | WP_032473221.1 | DUF645 family protein | - |
| GPW95_RS16675 | 505807..506289 | + | 483 | WP_032473215.1 | tetratricopeptide repeat protein | - |
| GPW95_RS16680 | 506426..506881 | + | 456 | WP_229767306.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS16685 | 507017..507496 | + | 480 | WP_032473214.1 | hypothetical protein | - |
| GPW95_RS16690 | 507666..508043 | - | 378 | WP_000734783.1 | PEGA domain-containing protein | - |
| GPW95_RS16700 | 508286..508738 | + | 453 | WP_032473195.1 | hypothetical protein | - |
| GPW95_RS16710 | 508953..509870 | + | 918 | WP_001887510.1 | alpha/beta hydrolase | - |
| GPW95_RS16715 | 510180..510351 | + | 172 | Protein_452 | DUF645 family protein | - |
| GPW95_RS16720 | 510557..511093 | + | 537 | WP_019829934.1 | GNAT family protein | - |
| GPW95_RS16725 | 511397..511567 | + | 171 | WP_000483444.1 | DUF645 family protein | - |
| GPW95_RS16730 | 511772..512242 | + | 471 | WP_032473170.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS16735 | 512407..513147 | + | 741 | WP_161779866.1 | PhzF family phenazine biosynthesis protein | - |
| GPW95_RS16740 | 513286..513822 | + | 537 | WP_071181460.1 | AAA family ATPase | - |
| GPW95_RS16745 | 513960..514718 | + | 759 | WP_001887513.1 | hypothetical protein | - |
| GPW95_RS16750 | 514963..515223 | + | 261 | WP_229767299.1 | DUF3709 domain-containing protein | - |
| GPW95_RS19285 | 515412..515510 | + | 99 | WP_229767298.1 | acetyltransferase | Antitoxin Detail |
| GPW95_RS16755 | 515531..515797 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| GPW95_RS16760 | 515784..516029 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| GPW95_RS16765 | 516173..516589 | + | 417 | WP_019830302.1 | lysozyme inhibitor LprI family protein | - |
| GPW95_RS16770 | 516745..517281 | + | 537 | WP_019829641.1 | nucleotidyltransferase family protein | - |
| GPW95_RS16775 | 517338..517532 | + | 195 | WP_154081050.1 | DUF3709 domain-containing protein | - |
| GPW95_RS16780 | 517550..517810 | + | 261 | WP_032473168.1 | DUF3709 domain-containing protein | - |
| GPW95_RS16785 | 518072..518512 | + | 441 | WP_032473167.1 | lysozyme inhibitor LprI family protein | - |
| GPW95_RS16790 | 518664..519116 | + | 453 | WP_032473166.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS16795 | 519320..519709 | + | 390 | WP_000491261.1 | VOC family protein | - |
| GPW95_RS16800 | 519861..520292 | + | 432 | WP_229767297.1 | DUF1993 family protein | - |
| GPW95_RS16805 | 520485..521258 | + | 774 | WP_139284613.1 | hypothetical protein | - |
| GPW95_RS16810 | 521399..521830 | + | 432 | WP_044128141.1 | hypothetical protein | - |
| GPW95_RS16815 | 521957..522412 | + | 456 | WP_001245329.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS19290 | 522918..522980 | + | 63 | Protein_474 | acetyltransferase | - |
| GPW95_RS16820 | 522999..523958 | + | 960 | WP_001887517.1 | restriction endonuclease | - |
| GPW95_RS16825 | 524093..524590 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GPW95_RS16830 | 524587..524859 | - | 273 | WP_019829878.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GPW95_RS16835 | 525849..526019 | + | 171 | WP_000483444.1 | DUF645 family protein | - |
| GPW95_RS16840 | 526224..526721 | + | 498 | WP_005526565.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS19295 | 526777..526839 | + | 63 | Protein_480 | acetyltransferase | - |
| GPW95_RS16845 | 526856..527494 | + | 639 | WP_019829928.1 | hypothetical protein | - |
| GPW95_RS16850 | 527648..528226 | + | 579 | WP_032473189.1 | DJ-1/PfpI family protein | - |
| GPW95_RS16855 | 528354..528644 | - | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GPW95_RS16860 | 528634..528882 | - | 249 | WP_019829909.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GPW95_RS16865 | 529093..529746 | + | 654 | WP_019829910.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| GPW95_RS16875 | 529911..530327 | + | 417 | WP_019829470.1 | hypothetical protein | - |
| GPW95_RS16880 | 530481..531128 | + | 648 | WP_032473193.1 | glutathione S-transferase family protein | - |
| GPW95_RS16885 | 531274..531687 | + | 414 | WP_032473194.1 | hypothetical protein | - |
| GPW95_RS16890 | 531698..533019 | - | 1322 | Protein_489 | IS4 family transposase ISIlo1 | Transposase |
| GPW95_RS16895 | 533123..533563 | + | 441 | WP_233269341.1 | hypothetical protein | - |
| GPW95_RS16900 | 534543..535058 | + | 516 | WP_019829908.1 | hypothetical protein | - |
| GPW95_RS16905 | 535266..535979 | + | 714 | WP_000123659.1 | Fic family protein | - |
| GPW95_RS16910 | 536116..536508 | + | 393 | WP_229767309.1 | GNAT family protein | - |
| GPW95_RS16920 | 536735..537070 | + | 336 | WP_019829648.1 | hypothetical protein | - |
| GPW95_RS16925 | 537220..538053 | + | 834 | WP_032473173.1 | hypothetical protein | - |
| GPW95_RS16930 | 538192..538605 | + | 414 | WP_019829604.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS16935 | 538910..539092 | + | 183 | WP_032473174.1 | DUF645 family protein | - |
| GPW95_RS16940 | 539283..539771 | + | 489 | WP_044128169.1 | GNAT family N-acetyltransferase | - |
| GPW95_RS16945 | 540067..540249 | + | 183 | WP_001907633.1 | DUF645 family protein | - |
| GPW95_RS16950 | 540450..540962 | + | 513 | WP_019829603.1 | hypothetical protein | - |
| GPW95_RS19300 | 541053..541154 | + | 102 | WP_080475881.1 | acetyltransferase | - |
| GPW95_RS16955 | 541138..541374 | - | 237 | WP_000772130.1 | RNA-binding protein | - |
| GPW95_RS16960 | 541513..542472 | - | 960 | Protein_503 | IS30 family transposase | - |
| GPW95_RS16965 | 542754..543159 | + | 406 | Protein_504 | VOC family protein | - |
| GPW95_RS19305 | 543193..543363 | - | 171 | Protein_505 | IS30 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|