MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP046025 Location: 1101565..1133445 Organism: Escherichia coli strain C439 Replicon: chromosome
Accession: NZ_CP046025 Location: 1101565..1133445 Organism: Escherichia coli strain C439 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJH08_RS05260 () | 1097749..1099017 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| GJH08_RS05265 () | 1099037..1100014 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| GJH08_RS05270 () | 1100350..1102602 | - | 2253 | Protein_1028 | hypothetical protein | - |
| GJH08_RS05280 () | 1103988..1105361 | + | 1374 | Protein_1029 | DUF5507 domain-containing protein | - |
| GJH08_RS05285 () | 1105725..1105934 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| GJH08_RS05290 () | 1106089..1106208 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| GJH08_RS05295 () | 1106273..1110853 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| GJH08_RS05300 () | 1111217..1111546 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| GJH08_RS05305 () | 1111567..1111884 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GJH08_RS05310 () | 1111922..1112122 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| GJH08_RS05315 () | 1112131..1112613 | - | 483 | WP_001407480.1 | RadC family protein | - |
| GJH08_RS05320 () | 1112622..1113080 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| GJH08_RS05325 () | 1113183..1113406 | - | 224 | Protein_1038 | DUF905 family protein | - |
| GJH08_RS05330 () | 1113978..1115681 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| GJH08_RS05335 () | 1115823..1116832 | + | 1010 | Protein_1040 | arsenic transporter | - |
| GJH08_RS05340 () | 1116845..1117159 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| GJH08_RS05345 () | 1117384..1117851 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| GJH08_RS05350 () | 1117875..1118318 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| GJH08_RS05355 () | 1118318..1118554 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| GJH08_RS05360 () | 1118595..1119296 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| GJH08_RS05365 () | 1119513..1120334 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| GJH08_RS05370 () | 1120426..1121289 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| GJH08_RS05375 () | 1121644..1122015 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| GJH08_RS05380 () | 1122008..1123081 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| GJH08_RS05385 () | 1123223..1123486 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| GJH08_RS05390 () | 1123846..1125462 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| GJH08_RS05395 () | 1125459..1127648 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| GJH08_RS05400 () | 1127826..1128452 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| GJH08_RS05405 () | 1128605..1130014 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| GJH08_RS05410 () | 1130143..1130355 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| GJH08_RS05415 () | 1130399..1131355 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| GJH08_RS05420 () | 1131599..1132840 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| GJH08_RS05430 () | 1133621..1134103 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| GJH08_RS05435 () | 1134274..1134711 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| GJH08_RS05440 () | 1134701..1134991 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| GJH08_RS05445 () | 1135053..1135394 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| GJH08_RS05450 () | 1135543..1137204 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| GJH08_RS05455 () | 1137290..1138168 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |